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Corynebacterium glutamicum R (cglu2)
Gene : BAF53538.1
DDBJ      :             hypothetical protein
Swiss-Prot:MEND_CORGB   RecName: Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;         Short=SEPHCHC synthase;         EC=2.2.1.9;AltName: Full=Menaquinone biosynthesis protein menD;

Homologs  Archaea  11/68 : Bacteria  338/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.36.1
:543 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->542 2jlcB PDBj 3e-34 30.7 %
:RPS:PDB   10->527 1bfdA PDBj 8e-41 18.1 %
:RPS:SCOP  10->171 1ozfA2  c.36.1.5 * 1e-22 21.1 %
:RPS:SCOP  338->529 1ozfA3  c.36.1.9 * 3e-12 16.9 %
:HMM:SCOP  21->185 1ybhA2 c.36.1.5 * 1.7e-23 25.8 %
:HMM:SCOP  340->531 1ybhA3 c.36.1.9 * 8.3e-20 27.2 %
:RPS:PFM   10->165 PF02776 * TPP_enzyme_N 3e-18 39.1 %
:HMM:PFM   9->166 PF02776 * TPP_enzyme_N 2e-28 28.5 158/172  
:HMM:PFM   393->524 PF02775 * TPP_enzyme_C 5.5e-08 27.3 121/150  
:BLT:SWISS 1->543 MEND_CORGB 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53538.1 GT:GENE BAF53538.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 627489..629120 GB:FROM 627489 GB:TO 629120 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53538.1 LENGTH 543 SQ:AASEQ MSSTPAQDLARAVIDSLAPHVTDVVLCPGSRNSPLSLELLARQDLRVHVRIDERSASFLALSLARTQARPVAVVMTSGTAVANCLPAVAEAAHAHIPLIVLSADRPAHLVGTGASQTINQTGIFGDLAPTVGITELDQVAQIAESLAQRASQIPRHFNLALDVPLVAPELPELHGEAVGASWTHRWINHGEVTVDLGEHTLVIAGDEAWEVEGLEDVPTIAEPTAPKPYNPVHPLAAEILLKEQVSAEGYVVNTRPDHVIVVGHPTLHRGVLKLMSDPEIKLTVLSRTDIITDPGRHADQVGSTVKVTGTQEKQWLKICSAASELSADGVRDVLDNQEFGFTGLHVAAAVADTLGTGDTLFATASNPIRDLSLVGMPFDGVDTFSPRGVAGIDGSVAQAIGTALAVQSRHPDEIRAPRTVALLGDLSFLHDIGGLLIGPDEPRPENLTIVVANDNGGGIFELLETGADGLRPNFERAFGTPHDASIADLCAGYGIEHQAVDNLQDLIIALVDTTEVSGFTVIEASTVRDTRRAQQQALMTKVR GT:EXON 1|1-543:0| SW:ID MEND_CORGB SW:DE RecName: Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Short=SEPHCHC synthase; EC=2.2.1.9;AltName: Full=Menaquinone biosynthesis protein menD; SW:GN Name=menD; OrderedLocusNames=cgR_0570; SW:KW Complete proteome; Magnesium; Manganese; Menaquinone biosynthesis;Metal-binding; Thiamine pyrophosphate; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->543|MEND_CORGB|0.0|100.0|543/543| GO:SWS:NREP 3 GO:SWS GO:0009234|"GO:menaquinone biosynthetic process"|Menaquinone biosynthesis| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| BL:PDB:NREP 1 BL:PDB:REP 10->542|2jlcB|3e-34|30.7|495/556| RP:PDB:NREP 1 RP:PDB:REP 10->527|1bfdA|8e-41|18.1|497/523| RP:PFM:NREP 1 RP:PFM:REP 10->165|PF02776|3e-18|39.1|156/170|TPP_enzyme_N| HM:PFM:NREP 2 HM:PFM:REP 9->166|PF02776|2e-28|28.5|158/172|TPP_enzyme_N| HM:PFM:REP 393->524|PF02775|5.5e-08|27.3|121/150|TPP_enzyme_C| GO:PFM:NREP 1 GO:PFM GO:0030976|"GO:thiamin pyrophosphate binding"|PF02776|IPR012001| RP:SCP:NREP 2 RP:SCP:REP 10->171|1ozfA2|1e-22|21.1|161/178|c.36.1.5| RP:SCP:REP 338->529|1ozfA3|3e-12|16.9|177/188|c.36.1.9| HM:SCP:REP 21->185|1ybhA2|1.7e-23|25.8|163/0|c.36.1.5|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 340->531|1ybhA3|8.3e-20|27.2|180/0|c.36.1.9|1/1|Thiamin diphosphate-binding fold (THDP-binding)| OP:NHOMO 414 OP:NHOMOORG 363 OP:PATTERN ------------------------11111111-----------------1-11--------------- ---1-11111111111111-11111111111111111111----1111111111111111--11111---1--------11-1-----1111-11----111111-111---------------11111111111111111----111111111111111111111-1111111111111111--------111111111111111111--11111111111111111111--111111111111111111111-------------------11-111-----------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------111--1--1-1------------------111----------------------------111-------111111-1111111111111-----1-------111112-2222221221-212211222222222222222221111222222222222222212212211--111111111111------------------111111111111111---------------------------------------11111111111111-----------------------------------------------------------------------11 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-13-111111-1-11------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 541 STR:RPRED 99.6 SQ:SECSTR cccccTTEHHHHHHHHHHHTccEEEEcccGGGHHHHTTcHHcTTcEEEEcccHHHHHHHHHHHHHHHTccEEEEEEHHHHHHHTHHHHHHHHHHTccEEEEEEEccHHHHTTTcTccTTGGGTTTTcccEEEcccGGGHHHHHHHHHHccccccEEEEEEGGGTTccccGGGGGGTTccccccHHHHHHHHHHHHHccccEEEEcHHHHHHTcHHHHcEEEcccccccccTTcTTEEEEccTcccHHHHHHHHTTccEEEEEccTccccccccccccTTcEEEEEEccHHHHHHccccEEEEccHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHccTTcEEEEEcGGGHHHHHHHccccccTTcEEEcTTcccccHHHHHHHHHHHcTTccTTc#HcccEEEEEEHHHHTTTGGGHHHHHHHTcccccEEEEEEccccHHHHHHHHHTTcTccTTcccccccccccHHHHHHHTTcEEEEEccHHHHHHHHHHHHHccccEEEEEEccTTcHHHHHHHHHHHH# DISOP:02AL 1-5| PSIPRED ccccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEccccHHHccccccccccHHHHHcccccccccccHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEcHHHHHHHHHccccEEEEcccccccccccccHHHHcccccccHHHHHHHHcccEEEEEccccccHHHHHHHHcccccEEEcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHcccEEEccccccccccHHHHHHHHHHHHHHccHHHcccccEEEEEEcHHHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHHHcccccccccccccccccHHHHHHHccccEEEEccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHcc //