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Corynebacterium glutamicum R (cglu2)
Gene : BAF53577.1
DDBJ      :             hypothetical protein
Swiss-Prot:RL4_CORGL    RecName: Full=50S ribosomal protein L4;

Homologs  Archaea  0/68 : Bacteria  905/915 : Eukaryota  146/199 : Viruses  0/175   --->[See Alignment]
c.22.1
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->213 2hguF PDBj 3e-32 43.3 %
:RPS:PDB   5->208 3bboG PDBj 4e-58 34.5 %
:RPS:SCOP  8->208 1vs6E1  c.22.1.1 * 6e-41 35.2 %
:HMM:SCOP  4->209 1dmgA_ c.22.1.1 * 3.1e-69 48.8 %
:RPS:PFM   19->202 PF00573 * Ribosomal_L4 3e-40 50.0 %
:HMM:PFM   19->207 PF00573 * Ribosomal_L4 6.3e-68 51.3 189/192  
:BLT:SWISS 1->218 RL4_CORGL e-121 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53577.1 GT:GENE BAF53577.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 676752..677408 GB:FROM 676752 GB:TO 677408 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53577.1 LENGTH 218 SQ:AASEQ MTNLKLDVQTADGNINGSVELPAEIFDREVSVALLHQVVNAQLAAARQGTHSTKTRGEVRGGGRKPFRQKGTGRARQGSIRAPHFTGGGISHGPKPRDYSQRTPKKMIKAALYGALSDRARNARIHVVSELVPGQTPSTKSAKAFIERLTERKSVLLVVSREDINAQKSANNLPGVHILAADQLNTYDVLKSDDVVFSVEALHTFINRASGAAQEEQN GT:EXON 1|1-218:0| SW:ID RL4_CORGL SW:DE RecName: Full=50S ribosomal protein L4; SW:GN Name=rplD; OrderedLocusNames=Cgl0507, cg0596; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->218|RL4_CORGL|e-121|100.0|218/218| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| BL:PDB:NREP 1 BL:PDB:REP 5->213|2hguF|3e-32|43.3|201/208| RP:PDB:NREP 1 RP:PDB:REP 5->208|3bboG|4e-58|34.5|203/211| RP:PFM:NREP 1 RP:PFM:REP 19->202|PF00573|3e-40|50.0|182/190|Ribosomal_L4| HM:PFM:NREP 1 HM:PFM:REP 19->207|PF00573|6.3e-68|51.3|189/192|Ribosomal_L4| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00573|IPR002136| GO:PFM GO:0005622|"GO:intracellular"|PF00573|IPR002136| GO:PFM GO:0005840|"GO:ribosome"|PF00573|IPR002136| GO:PFM GO:0006412|"GO:translation"|PF00573|IPR002136| RP:SCP:NREP 1 RP:SCP:REP 8->208|1vs6E1|6e-41|35.2|199/201|c.22.1.1| HM:SCP:REP 4->209|1dmgA_|3.1e-69|48.8|205/225|c.22.1.1|1/1|Ribosomal protein L4| OP:NHOMO 1120 OP:NHOMOORG 1051 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111-11111111111111111111--111111111111111111111111111111111111111111111111111111111111111111111121111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111-11111111111111111111111111111111 ----111-----1-111111111111111-1111111111-1111111111111-1111111-11-------1-1-----------11-1211111---1-11112-11123111111-1-11121111353-111-1-111111--1--1--11--11111121-1111911212222I2222143531321121112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 210 STR:RPRED 96.3 SQ:SECSTR ###cEEEccccccccccEEEEccccccccccTTTTTTHHHHHHHHHccccccccccTTcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHTTcccccccGGGTTccccHHHHTTHHHcccccccccEEccccccccTTTccccccEEcccccccHHHHHHcccEEccTTHHHHHHHHHHHHc##### DISOP:02AL 1-2,48-78,210-219| PSIPRED ccccEEEEEcccccEEEEEEccHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHccccccEEEEEccccccHHHHHcccccEEEEEcccccHHHHHccccEEEEHHHHHHHHHHHccccccccc //