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Corynebacterium glutamicum R (cglu2)
Gene : BAF53610.1
DDBJ      :             hypothetical protein
Swiss-Prot:RS5_CORGL    RecName: Full=30S ribosomal protein S5;

Homologs  Archaea  11/68 : Bacteria  908/915 : Eukaryota  29/199 : Viruses  0/175   --->[See Alignment]
d.14.1d.50.1
:211 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->192 1vs5E PDBj 2e-40 53.1 %
:RPS:PDB   46->192 3d5aE PDBj 2e-34 44.9 %
:RPS:SCOP  46->111 1fjgE2  d.50.1.2 * 3e-11 37.9 %
:RPS:SCOP  112->190 1fjgE1  d.14.1.1 * 2e-12 51.9 %
:HMM:SCOP  43->111 1fjgE2 d.50.1.2 * 5.6e-24 56.5 %
:HMM:SCOP  112->192 1fjgE1 d.14.1.1 * 2.3e-25 59.3 %
:RPS:PFM   46->109 PF00333 * Ribosomal_S5 3e-10 54.7 %
:RPS:PFM   127->190 PF03719 * Ribosomal_S5_C 4e-15 68.8 %
:HMM:PFM   45->108 PF00333 * Ribosomal_S5 4e-32 60.9 64/67  
:HMM:PFM   118->191 PF03719 * Ribosomal_S5_C 1e-31 64.9 74/74  
:BLT:SWISS 1->211 RS5_CORGL 2e-89 100.0 %
:PROS 61->93|PS00585|RIBOSOMAL_S5
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53610.1 GT:GENE BAF53610.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 699401..700036 GB:FROM 699401 GB:TO 700036 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53610.1 LENGTH 211 SQ:AASEQ MPGRERRDGGRSADDNKQNDRNERRGGGRRDDRRNQQQDERSQYIERVVTINRVSKVVKGGRRFSFTALVIVGDGKGMVGVGYGKAKEVPAAIQKGAEEARKNFFRVPMVNGTITHPVQGEKAAGIVMLKPAAPGTGVIAGGAARPVLECAGIQDILSKSLGSDNAINVVHATVDGLKQLVRPEEVAARRGKTIEEVAPARILRARAGQEA GT:EXON 1|1-211:0| SW:ID RS5_CORGL SW:DE RecName: Full=30S ribosomal protein S5; SW:GN Name=rpsE; OrderedLocusNames=Cgl0540, cg0631; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->211|RS5_CORGL|2e-89|100.0|211/211| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| PROS 61->93|PS00585|RIBOSOMAL_S5|PDOC00505| SEG 18->41|qndrnerrgggrrddrrnqqqder| SEG 70->84|vivgdgkgmvgvgyg| BL:PDB:NREP 1 BL:PDB:REP 46->192|1vs5E|2e-40|53.1|147/150| RP:PDB:NREP 1 RP:PDB:REP 46->192|3d5aE|2e-34|44.9|147/151| RP:PFM:NREP 2 RP:PFM:REP 46->109|PF00333|3e-10|54.7|64/67|Ribosomal_S5| RP:PFM:REP 127->190|PF03719|4e-15|68.8|64/74|Ribosomal_S5_C| HM:PFM:NREP 2 HM:PFM:REP 45->108|PF00333|4e-32|60.9|64/67|Ribosomal_S5| HM:PFM:REP 118->191|PF03719|1e-31|64.9|74/74|Ribosomal_S5_C| GO:PFM:NREP 9 GO:PFM GO:0003723|"GO:RNA binding"|PF00333|IPR013810| GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00333|IPR013810| GO:PFM GO:0005622|"GO:intracellular"|PF00333|IPR013810| GO:PFM GO:0005840|"GO:ribosome"|PF00333|IPR013810| GO:PFM GO:0006412|"GO:translation"|PF00333|IPR013810| GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF03719|IPR005324| GO:PFM GO:0005622|"GO:intracellular"|PF03719|IPR005324| GO:PFM GO:0005840|"GO:ribosome"|PF03719|IPR005324| GO:PFM GO:0006412|"GO:translation"|PF03719|IPR005324| RP:SCP:NREP 2 RP:SCP:REP 46->111|1fjgE2|3e-11|37.9|66/69|d.50.1.2| RP:SCP:REP 112->190|1fjgE1|2e-12|51.9|79/81|d.14.1.1| HM:SCP:REP 43->111|1fjgE2|5.6e-24|56.5|69/69|d.50.1.2|1/1|dsRNA-binding domain-like| HM:SCP:REP 112->192|1fjgE1|2.3e-25|59.3|81/81|d.14.1.1|1/1|Ribosomal protein S5 domain 2-like| OP:NHOMO 986 OP:NHOMOORG 948 OP:PATTERN -----1-----------------1--------111--1------1---1-111--------------- 1111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111-11111111111111111111111111111111 ------1-----111----------------------------------------------------------1------------------------------1--1------------------------------------------------------------------11112P322211143-21--11111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 156 STR:RPRED 73.9 SQ:SECSTR #########################################ETTEEEEEEEEEEEccccccccEEEEEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHHccccccccTTcccccEEEEETTEEEEEEEccTTcEEEccHHHHHHHHTTTccEEEEEEEEcccHHHHHHHHHHHHHHcccHHHHHHHHHcccccc############## DISOP:02AL 1-45,200-212| PSIPRED ccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccEEEcccEEEEEEEEEEEEcccccEEEEEcccccccHHHHHHHHHHHHccEEEEEccccccccEEEEEccEEEEEEEccccccEEEccHHHHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHccccccccccccc //