[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF53801.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  562/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
b.34.1d.104.1
:288 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->285 2cghB PDBj 8e-25 37.1 %
:RPS:PDB   28->285 2cghA PDBj 2e-43 26.7 %
:RPS:SCOP  48->232 1wnlA2  d.104.1.2 * 5e-28 31.0 %
:RPS:SCOP  239->286 1wnlA1  b.34.1.1 * 2e-06 31.1 %
:HMM:SCOP  32->237 1biaA3 d.104.1.2 * 3.4e-49 35.8 %
:HMM:SCOP  239->287 1wqwA1 b.34.1.1 * 1.5e-06 36.2 %
:RPS:PFM   84->177 PF03099 * BPL_LplA_LipB 6e-08 41.3 %
:HMM:PFM   84->177 PF03099 * BPL_LplA_LipB 4e-17 33.0 91/125  
:HMM:PFM   238->284 PF02237 * BPL_C 1.7e-06 23.9 46/48  
:BLT:SWISS 30->283 BIRA_ECOLI 8e-23 30.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53801.1 GT:GENE BAF53801.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 918993..919859 GB:FROM 918993 GB:TO 919859 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53801.1 LENGTH 288 SQ:AASEQ MGVSPLKRAFRRDPTTLASMNVDISRSREPLNVELLKEKLLQNGDFGQVIYEKVTGSTNADLLALAGSGAPNWTVKTVEFQDHARGRLGRPWSAPEGSQTIVSVLVQLSTDQVDRIGTIPLAAGLAVMDALNDLGVEDAGLKWPNDVQIHGKKLCGILVEATGFDSTPTVVIGWGTNISLTKEELPVPHATSLALEGVEVDRTTFLINMLTHLHTRLDQWQGPSVDWLDDYRAVCSSIGQDVRVLLPGNKELLGEAIGVATGGEIRVRDASGTVHTLNAGEITHLRLQ GT:EXON 1|1-288:0| BL:SWS:NREP 1 BL:SWS:REP 30->283|BIRA_ECOLI|8e-23|30.0|250/321| BL:PDB:NREP 1 BL:PDB:REP 28->285|2cghB|8e-25|37.1|237/242| RP:PDB:NREP 1 RP:PDB:REP 28->285|2cghA|2e-43|26.7|236/238| RP:PFM:NREP 1 RP:PFM:REP 84->177|PF03099|6e-08|41.3|92/118|BPL_LplA_LipB| HM:PFM:NREP 2 HM:PFM:REP 84->177|PF03099|4e-17|33.0|91/125|BPL_LplA_LipB| HM:PFM:REP 238->284|PF02237|1.7e-06|23.9|46/48|BPL_C| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF03099|IPR004143| GO:PFM GO:0006464|"GO:protein modification process"|PF03099|IPR004143| RP:SCP:NREP 2 RP:SCP:REP 48->232|1wnlA2|5e-28|31.0|171/188|d.104.1.2| RP:SCP:REP 239->286|1wnlA1|2e-06|31.1|45/47|b.34.1.1| HM:SCP:REP 32->237|1biaA3|3.4e-49|35.8|204/207|d.104.1.2|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 239->287|1wqwA1|1.5e-06|36.2|47/0|b.34.1.1|1/1|C-terminal domain of transcriptional repressors| OP:NHOMO 627 OP:NHOMOORG 610 OP:PATTERN --1-1-111111111-1------11-11--11111-1-111111121111111-1111111------- 1---111111111111111-11111111111111111111111111-111111111-111111111111111111111---11---1-11---1111----1111---1----------1----111111111111111111111-----1--------------1-1-1-------------111--11--111111111111111111111211111111-1-11111111111111111111111111111--------1-2211---11121212--------1111111111111-----------------------11111111111111111111111111-11111-11111-1111111111-12----1111-11--111-1-1-2-11111111111-11-11-1-1111111-111111111111-----1---1---------------1111111---------11--------------11-111----111111--------1------111---1-------1--11--1-111111111--1111111111--11121-1--1111-11111111111111-22-------------------------111111111111111111111111111111111--1---------11111111111111111-1111111111111111111111111111111111111111111111111111-1111111111111111111111111--1-1-11111111111111----------11111111111111111111-1-1111--11111111111--111------------1-12----------------------------------------------------12- ----------1--------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------1---------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 268 STR:RPRED 93.1 SQ:SECSTR ###################EEEEcccTcccccHHHHHHHHccTTcccEEEEEcccccHHHHHHHHHHTTcccTEEEEEcccccTTcEEEEEEEEEcTTccGGGTTEEcTTccGGHHHHHHHHHHHHHHGGGccccGGGEEEETTTEEEETTEEEEEEEEEEETTEEEEEEEEEccccccTGGGTGGGTTcccHHHHcccccHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHTcccTTcEEEEEETTTEEEEEEEEEEcTTccEEEEETTTEEEEEcccccEEccc# DISOP:02AL 1-5,8-8,16-25| PSIPRED cccccHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHccccccEEEEEEccccccccccccEEcccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccEEEccEEEEEEEEEEEccccccEEEEEEcccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccEEEEEEcccEEEEEEEEEEcccccEEEEcccccEEEEEEEEEEEEEEc //