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Corynebacterium glutamicum R (cglu2)
Gene : BAF53841.1
DDBJ      :             hypothetical protein
Swiss-Prot:SECA1_CORGB  RecName: Full=Protein translocase subunit secA 1;

Homologs  Archaea  0/68 : Bacteria  908/915 : Eukaryota  29/199 : Viruses  0/175   --->[See Alignment]
a.162.1a.172.1c.37.1
:845 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->830 1nktA PDBj 0.0 67.2 %
:RPS:PDB   14->830 3dinA PDBj 1e-96 46.7 %
:RPS:SCOP  1->254 1m6nA3  c.37.1.19 * 2e-64 55.1 %
:RPS:SCOP  228->348 1m6nA1  a.162.1.1 * 5e-26 38.0 %
:RPS:SCOP  339->395 1m6nA3  c.37.1.19 * 3e-10 43.9 %
:RPS:SCOP  397->614 1nktA4  c.37.1.19 * 2e-23 64.6 %
:RPS:SCOP  615->844 1m6nA2  a.172.1.1 * 2e-61 31.3 %
:HMM:SCOP  1->395 1m6nA3 c.37.1.19 * 1.7e-84 43.2 %
:HMM:SCOP  396->614 1nktA4 c.37.1.19 * 1.8e-59 40.2 %
:HMM:SCOP  615->843 1m6nA2 a.172.1.1 * 2e-70 43.6 %
:RPS:PFM   14->370 PF07517 * SecA_DEAD e-128 63.6 %
:RPS:PFM   612->830 PF07516 * SecA_SW 8e-40 47.8 %
:HMM:PFM   9->381 PF07517 * SecA_DEAD 4.1e-119 66.9 260/266  
:HMM:PFM   612->832 PF07516 * SecA_SW 1.7e-69 45.5 211/214  
:BLT:SWISS 1->845 SECA1_CORGB 0.0 100.0 %
:PROS 480->495|PS01312|SECA
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53841.1 GT:GENE BAF53841.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 956501..959038 GB:FROM 956501 GB:TO 959038 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53841.1 LENGTH 845 SQ:AASEQ MFGLSKVLRVGEGRAVKRLHKIADQVIALEEKFANLTDEELKAKTAEFKERIAGGEGLDEIFLEAFATAREASWRVLGQKHYRVQIMGGAALHFGNVAEMRTGEGKTLTCVLPAYLNALEGKGVHVVTVNDYLAKRDAEMVGRVHRYLGLEVGVILSDMRPDERRKAYTADITYGTNNELGFDYLRDNMARSLSDLVQRGHNYAIVDEVDSILIDEARTPLIISGPVDGTSQFYNVFAQIVPRMTKDVHYEVDERKKTVGVKEEGVEYVEDQLGIDNLYAPEHSQLVSYLNNAIKAQELFTRDKDYIVRNGEVMIVDGFTGRVLAGRRYNEGMHQAIEAKERVEIKNENQTLATVTLQNYFRLYTKLAGMTGTAETEAAELNQIYKLDVIAIPTNRPNQREDLTDLVYKTQEAKFAAVVDDIAERTEKGQPVLVGTVSVERSEYLSQLLTKRGIKHNVLNAKHHEQEAQIVAQAGLPGAVTVATNMAGRGTDIVLGGNPEILLDIKLRERGLDPFEDEESYQEAWDAELPAMKQRCEERGDKVREAGGLYVLGTERHESRRIDNQLRGRSARQGDPGSTRFYLSMRDDLMVRFVGPTMENMMNRLNVPDDVPIESKTVTNSIKGAQAQVENQNFEMRKNVLKYDEVMNEQRKVIYSERREILESADISRYIQNMIEETVSAYVDGATANGYVEDWDLDKLWNALEALYDPSINWTDLVEGSEYGKPGELSAEDLRTALVNDAHAEYAKLEEAVSAIGGEAQIRNIERMVLMPVIDTKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQKEGGDMFNGMKDGIKEETVRQLFLLRKQFIKQDAEVAD GT:EXON 1|1-845:0| SW:ID SECA1_CORGB SW:DE RecName: Full=Protein translocase subunit secA 1; SW:GN Name=secA1; OrderedLocusNames=cgR_0868; SW:KW ATP-binding; Cell membrane; Complete proteome; Cytoplasm; Membrane;Nucleotide-binding; Protein transport; Translocation; Transport. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->845|SECA1_CORGB|0.0|100.0|845/845| GO:SWS:NREP 8 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0015031|"GO:protein transport"|Protein transport| GO:SWS GO:0055085|"GO:transmembrane transport"|Translocation| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 480->495|PS01312|SECA|PDOC01016| SEG 256->270|kktvgvkeegveyve| SEG 371->380|tgtaeteaae| BL:PDB:NREP 1 BL:PDB:REP 4->830|1nktA|0.0|67.2|812/836| RP:PDB:NREP 1 RP:PDB:REP 14->830|3dinA|1e-96|46.7|756/816| RP:PFM:NREP 2 RP:PFM:REP 14->370|PF07517|e-128|63.6|357/376|SecA_DEAD| RP:PFM:REP 612->830|PF07516|8e-40|47.8|207/213|SecA_SW| HM:PFM:NREP 2 HM:PFM:REP 9->381|PF07517|4.1e-119|66.9|260/266|SecA_DEAD| HM:PFM:REP 612->832|PF07516|1.7e-69|45.5|211/214|SecA_SW| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF07517|IPR011115| GO:PFM GO:0016020|"GO:membrane"|PF07517|IPR011115| GO:PFM GO:0017038|"GO:protein import"|PF07517|IPR011115| GO:PFM GO:0016020|"GO:membrane"|PF07516|IPR011116| GO:PFM GO:0017038|"GO:protein import"|PF07516|IPR011116| RP:SCP:NREP 5 RP:SCP:REP 1->254|1m6nA3|2e-64|55.1|254/273|c.37.1.19| RP:SCP:REP 228->348|1m6nA1|5e-26|38.0|121/122|a.162.1.1| RP:SCP:REP 339->395|1m6nA3|3e-10|43.9|57/273|c.37.1.19| RP:SCP:REP 397->614|1nktA4|2e-23|64.6|212/219|c.37.1.19| RP:SCP:REP 615->844|1m6nA2|2e-61|31.3|217/232|a.172.1.1| HM:SCP:REP 1->395|1m6nA3|1.7e-84|43.2|271/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 396->614|1nktA4|1.8e-59|40.2|219/219|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 615->843|1m6nA2|2e-70|43.6|218/232|a.172.1.1|1/1|Helical scaffold and wing domains of SecA| OP:NHOMO 1106 OP:NHOMOORG 937 OP:PATTERN -------------------------------------------------------------------- 1111122222222221222-22222222222232221111111111111111111111112211221211211111111111111111111111113111111111111111111111111111111211111111111111111111111111111211111111111111111111111111111111112122222122222211211111122122221222222221112222221222222222221111111111121111121121111112221111111211212121211111111111111211111111112111111111111122111111111111121111111111111111111113111111111111112111211211111111111-12123121111111111111111111111111111111211111111111111111111111111121111111111111111111111121111111111111111111111111111111111111111111111111111111111111111112111111211211111111111111111111111111111111111111111111111-1111111111111111111111111111111111--1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111311111111111111111111111-11111111111111111111111111111111 ----1-1----------------------------------------------------------------------------------------------------12-------------------------------------------------2----3-9--2----122322I222323212-2311----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 833 STR:RPRED 98.6 SQ:SECSTR cTTHcEEEEEcccHHHHHHHHHHHHHHHHHHTTTTTccHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHcccccccTTHHHHHHHHHccEEcccccccHHHHHHHHHHHHHTTcccEEEEEccHHHHHHHHHHTHHHHHHTTccccEEcccccEEcHHHHHHccEEEEEHHHHHHHHHHccccccTTcccccccccEEEETHHHHTTccccccEEcccccTTHHHHHHHHHHHHHHHHTccccccccccccccccHHHHHHHHHcccccccccTTTHHHHHHHHHHHHHHHHccTTTccccTTTcccccccTTccccccccccccHHHHHHHHccccccccccEEcccTTTTTGGGcccEEEEccccHHHHHHHHHTccccccccccccTTccEEEEEEEEcccTHHHHHHHHHHHHHHHTTccEEEEEccHHHHHHHHHHHHHTccccEEEccccHHHHHHHHHHccccccEEEEEGGGcccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHccccccccGGGccccEEEEccccccHHHHHHHHHTcccTTcccEEEEEEETTccTTTTccHHHHHHHHHTTccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHTTcccTccccccHHHHHHHHHHTcccccccTTccccccccccccccccccHHHHHHHHHHHHHHHHHHGGGHHHHccGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTcccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTccc############ DISOP:02AL 1-1,607-608,834-846| PSIPRED cccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHcccEEEccHHHHHHHHHHHHHccHHHcccccccEEEEEccccEEEccccccEEEccccccccHHHHHHHHHHHHccccccEEEcccccEEEEcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEEEcccccccccccccHHHHHHHHHHHccccccccEEEEEHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHccccccEEEEEccccccccEEEcccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHcccccccccEEEEEHHHHHHHHHccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccccc //