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Corynebacterium glutamicum R (cglu2)
Gene : BAF53978.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  308/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:386 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   41->366 2wkgA PDBj 1e-33 33.9 %
:RPS:PDB   5->346 1cgxA PDBj 8e-35 22.3 %
:RPS:SCOP  37->335 1h3gA3  c.1.8.1 * 4e-33 22.7 %
:HMM:SCOP  32->336 1j0hA3 c.1.8.1 * 4.5e-77 35.5 %
:RPS:PFM   41->287 PF00128 * Alpha-amylase 4e-32 35.8 %
:HMM:PFM   40->114 PF00128 * Alpha-amylase 5.2e-24 44.0 75/316  
:HMM:PFM   124->292 PF00128 * Alpha-amylase 2.8e-32 32.5 169/316  
:BLT:SWISS 34->334 CDAS_BACSH 4e-32 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF53978.1 GT:GENE BAF53978.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 1105317..1106477 GB:FROM 1105317 GB:TO 1106477 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF53978.1 LENGTH 386 SQ:AASEQ MSFAEHAIIWHVYPLGALGAPIRPEAHAPVTHRLPNLIGWLDYVVELGCNALMLGPVFESVSHGYDTLDFYRIDPRLGAEEDMDALLEAANQRGIGVLFDGVFNHVSSSSKYFDLTTGASFEGHDILAELDHTNPAVVDLVVDVMNHWLDRGIAGWRLDAVYAIAPEFWEKVLPEVRRKHPHAWIVGEMIHGDYSDYVQKSGIDSVTEYELWKAIWSSIKERNFFELEWTLSRHNEFLDTFVPQTFVGNHDVTRITTRIGQSNAILAAAILFTVGGTPSIYYGDEQGFTGLKEDNVFGDDAIRPPLPAEFSPLGTWIENIYKALIALRRQHPWLYQAHTEVLEIANEAMTYKSVGLGGEELTVHLDLEEVSVRILDGEKVLFQYSA GT:EXON 1|1-386:0| BL:SWS:NREP 1 BL:SWS:REP 34->334|CDAS_BACSH|4e-32|33.3|294/591| SEG 79->90|aeedmdalleaa| BL:PDB:NREP 1 BL:PDB:REP 41->366|2wkgA|1e-33|33.9|316/486| RP:PDB:NREP 1 RP:PDB:REP 5->346|1cgxA|8e-35|22.3|332/686| RP:PFM:NREP 1 RP:PFM:REP 41->287|PF00128|4e-32|35.8|246/296|Alpha-amylase| HM:PFM:NREP 2 HM:PFM:REP 40->114|PF00128|5.2e-24|44.0|75/316|Alpha-amylase| HM:PFM:REP 124->292|PF00128|2.8e-32|32.5|169/316|Alpha-amylase| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00128|IPR006047| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00128|IPR006047| GO:PFM GO:0043169|"GO:cation binding"|PF00128|IPR006047| RP:SCP:NREP 1 RP:SCP:REP 37->335|1h3gA3|4e-33|22.7|299/422|c.1.8.1| HM:SCP:REP 32->336|1j0hA3|4.5e-77|35.5|299/0|c.1.8.1|1/1|(Trans)glycosidases| OP:NHOMO 479 OP:NHOMOORG 339 OP:PATTERN --1-1-----------1-11-1--1--1112------------------------1-221-------- 1---2-31111-1--11----11111-----11111-----1---11-111-1-21------111--111-----1211--1------11---2-----1-1-----12---------------------------12222---6-113111-----111111-1-22221-1-----1----3521112-24-1111111111111111111-1111232-233211111-3--------------------12--12--112221122-2----333---22221---1111211-1-2----2222----111---111-11-12-------2-1-211-2121-1---131----1--41-132121-----1-----------1-----1--1-------------------1----------------1---1--------------------------------------------------------11-1--------------------1---------------------------------------------------------------------------1--1-1-----------------------------2321-1--112------------------1-------------11--11-1111111111-1111111211111111111111-----1111-111111111111---1111--211111111111-------------1-2------2---------------------4----------------------------222-----232331111111---------------------------3----------------1----1---242232-4431-- --11--2------------1--------------------------11--1-------1---------------------------31--11--1---1-------------------------------------------------------------------------------34------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 386 STR:RPRED 100.0 SQ:SECSTR cHHcTTccEEEccGGGccccGGGcccGGGccTTcccTTccTTHHHHHTccEEEEcccEEEccTcccEEEEEEEcTTTccHHHHHHHHHHHHHTTcEEEEEEcTTEEEEccTTccTTTTcEEETTEEEEEccTTcHHHHHHHHHHHHHHHHTTccEEEEccGGGccHHHHHHHHHHHHTTccTcEEEEcccccTTcccHHHHcccEEccHHHHHHHHHHHTccccccHHHHHHHHHHHHHHcTTGEccccTTccccccTTccHHHHHHHHHHHHcccEEEEETTGGGTcccccTTGGGccccccccccccGGGcccHHHHHHHHHHHHHHHcHHHHHcEEEEEEEccTTTEEEEEEETTEEEEEEEEcccccEEEEGGGccEEcccc PSIPRED cccHHcccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEccccccccHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccHHHccHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHccccccEEccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccHHHHHHHHHHHHHccccEEEEccHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcHHHccccEEEEEccccEEEEEEEcccccEEEEEEEcccccEEcccccEEEEcccc //