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Corynebacterium glutamicum R (cglu2)
Gene : BAF54083.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:159 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->129 3f3xA PDBj 6e-07 32.3 %
:RPS:PDB   39->136 2d1hB PDBj 3e-11 17.2 %
:RPS:SCOP  29->157 2fbiA1  a.4.5.28 * 5e-14 21.3 %
:HMM:SCOP  20->155 2hr3A1 a.4.5.28 * 5.5e-18 29.8 %
:RPS:PFM   69->112 PF01047 * MarR 2e-04 50.0 %
:HMM:PFM   52->113 PF01047 * MarR 5.4e-13 36.8 57/59  
:BLT:SWISS 29->147 MHQR_BACSU 1e-08 28.4 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54083.1 GT:GENE BAF54083.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 1217707..1218186 GB:FROM 1217707 GB:TO 1218186 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54083.1 LENGTH 159 SQ:AASEQ MITELKTGQLKRPQLLVDGDSGLAHRWNALKVIHDRIESQVEKDLQKLHGISVREFSLLTVLNRQHDGEGGHLTMAELANTVVLSQSATTRLVSRLEDRGLLTRYICATDRRGIYTDISSIGKVLLEEAMPTNEASLQAVLDQLRNEPELAPFIEVMEN GT:EXON 1|1-159:0| BL:SWS:NREP 1 BL:SWS:REP 29->147|MHQR_BACSU|1e-08|28.4|109/145| BL:PDB:NREP 1 BL:PDB:REP 28->129|3f3xA|6e-07|32.3|96/139| RP:PDB:NREP 1 RP:PDB:REP 39->136|2d1hB|3e-11|17.2|93/96| RP:PFM:NREP 1 RP:PFM:REP 69->112|PF01047|2e-04|50.0|44/59|MarR| HM:PFM:NREP 1 HM:PFM:REP 52->113|PF01047|5.4e-13|36.8|57/59|MarR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01047|IPR000835| GO:PFM GO:0005622|"GO:intracellular"|PF01047|IPR000835| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01047|IPR000835| RP:SCP:NREP 1 RP:SCP:REP 29->157|2fbiA1|5e-14|21.3|122/136|a.4.5.28| HM:SCP:REP 20->155|2hr3A1|5.5e-18|29.8|131/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 54 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- ----4-1-111-------------------------2433-111--1-----3121-1------1-1342-----------------------------------------------------------------------------------------------------------------------------------------------1--------111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------11-1------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 140 STR:RPRED 88.1 SQ:SECSTR ##################TcccccccHHHHHHHHHHHHTTTHHHHHHHHTccHHHHHHHHHHHHTTTTHcccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEcccEEEEEcTTHHHHHHHHHHHHHHHHHHTHHHHHHHHccHHHHHHHHHHHH# DISOP:02AL 7-7,159-160| PSIPRED cHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHc //