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Corynebacterium glutamicum R (cglu2)
Gene : BAF54341.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  18/68 : Bacteria  551/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
d.52.9f.59.1
:318 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   96->291 2qfiA PDBj 4e-09 24.0 %
:RPS:PDB   228->311 3byrA PDBj 5e-14 24.1 %
:RPS:SCOP  35->230 2qfiA2  f.59.1.1 * 1e-21 16.9 %
:RPS:SCOP  232->311 2qfiA1  d.52.9.1 * 5e-12 21.5 %
:RPS:PFM   66->307 PF01545 * Cation_efflux 2e-40 43.4 %
:HMM:PFM   37->312 PF01545 * Cation_efflux 7.3e-75 37.0 276/285  
:BLT:SWISS 66->317 CZCD_BACA2 1e-38 31.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54341.1 GT:GENE BAF54341.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 1489249..1490205 GB:FROM 1489249 GB:TO 1490205 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54341.1 LENGTH 318 SQ:AASEQ MESHDLQQRSYAHNPDGHDHSHDGLGHSHAPSSLKALFAVIIFTSIIFLAELIAGLISGSLALLADAMHMLSDSTGLIIAAVAMLIGRRARTSRATYGYKRAEVLAAMVNATVVTALSVWIVVEAIMRLGKDVEIQTNLMLIVAVIGFVTNGISALVLMRHQDGNINMRGAFLHVLSDMLGSVAVIIAGLVIRYTGWMPADTIASIAIAAIIIPRAFSLLKEALNILLERVPTGAEPAEVDAALRKVPGVSDVHDLHIWSIDGKEILATVHLVVDSSTNQLHSCGVLDRAEAELSKLGILHSTIQLESADHSDHESVC GT:EXON 1|1-318:0| BL:SWS:NREP 1 BL:SWS:REP 66->317|CZCD_BACA2|1e-38|31.7|252/313| TM:NTM 6 TM:REGION 40->62| TM:REGION 66->87| TM:REGION 105->127| TM:REGION 137->159| TM:REGION 169->191| TM:REGION 205->227| SEG 16->29|dghdhshdglghsh| SEG 52->65|liaglisgslalla| SEG 203->213|iasiaiaaiii| BL:PDB:NREP 1 BL:PDB:REP 96->291|2qfiA|4e-09|24.0|192/286| RP:PDB:NREP 1 RP:PDB:REP 228->311|3byrA|5e-14|24.1|83/89| RP:PFM:NREP 1 RP:PFM:REP 66->307|PF01545|2e-40|43.4|242/282|Cation_efflux| HM:PFM:NREP 1 HM:PFM:REP 37->312|PF01545|7.3e-75|37.0|276/285|Cation_efflux| GO:PFM:NREP 4 GO:PFM GO:0006812|"GO:cation transport"|PF01545|IPR002524| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF01545|IPR002524| GO:PFM GO:0016020|"GO:membrane"|PF01545|IPR002524| GO:PFM GO:0055085|"GO:transmembrane transport"|PF01545|IPR002524| RP:SCP:NREP 2 RP:SCP:REP 35->230|2qfiA2|1e-21|16.9|195/204|f.59.1.1| RP:SCP:REP 232->311|2qfiA1|5e-12|21.5|79/82|d.52.9.1| OP:NHOMO 1315 OP:NHOMOORG 757 OP:PATTERN --------11111--1--------1-------1----------1----1-11---211111------- 111-111111111111111-111131111111211144131--13113111131211-11222111121111111111----111111111---11----1-111-1------------------11-111--121-----1-1111111----------1-----1-2---------------11--11121211111121-1111111-111111123211112222222212222222222222222211-1111111111111111---111111111----2--1111111111111111111111111--111-------1--------1-1-1---111-1------------------------11111113-----111121-311311-111-111112-22112131-11-------1-----121114-21-11--1111111111111121-11111111-----------------1111-21111-11---------------11--------1---111-1-1--1111-1--21111-11-------1-111111111--1--------1111112111111211-1221-11111----------1--2122---32112211-----12----2---121----1---------11---21111-111111-1111-1111111111111111111--1111111111111111111111111--111111111111---211111111115-11---1-1-1--1---11111121-11--1112-121-11132112---------2-111---1-21-1111112111111111--1-222222------------------------------------111111-111--- 1111441-522-11211333332232332111122211111112-1111212221221222211112121231113323322111221-221111112212-15351423F3957666134655B74A3EZ7-95F2363A35533754465483887654355243D4613643111-----1232173831143231 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 213 STR:RPRED 67.0 SQ:SECSTR ###############################################################################################cccccTHHHHHHHTTTTTTcccTTGGGcccTTccTTTTTccccccGGGcccGGGGTTTHHHHGGGcccTTc##GGGGGGHHHHTccccTTccc#TTcccccTTccccccHHHHTTTTTTTTTTHHHHTGGGcccccccHHHHHHHHHHHHHHTTccEEEEEEEEEETTTEEEEEEEEEccTTccHHHHHHHHHHHHHHHHHcTTEEEEEEEEcGGG####### DISOP:02AL 1-12,15-15,18-34,312-314,316-316| PSIPRED ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccEEEEEEEEcccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccc //