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Corynebacterium glutamicum R (cglu2)
Gene : BAF54424.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  884/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
a.2.9b.7.1c.37.1
:720 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->639 1t5lA PDBj 0.0 56.7 %
:RPS:PDB   46->639 1d9xA PDBj e-138 58.4 %
:RPS:PDB   670->715 1e52A PDBj 7e-08 30.4 %
:RPS:SCOP  44->101 2yrbA1  b.7.1.1 * 7e-05 10.3 %
:RPS:SCOP  95->352 2b2nA1  c.37.1.19 * 2e-63 22.8 %
:RPS:SCOP  459->630 1c4oA2  c.37.1.19 * 2e-22 64.0 %
:RPS:SCOP  673->715 1qojA  a.2.9.1 * 3e-09 27.9 %
:HMM:SCOP  46->458 1d9xA1 c.37.1.19 * 6.3e-130 44.3 %
:HMM:SCOP  457->641 2eyqA5 c.37.1.19 * 4.6e-37 32.4 %
:HMM:SCOP  661->716 1e52A_ a.2.9.1 * 2.1e-10 41.1 %
:RPS:PFM   61->164 PF04851 * ResIII 4e-17 41.3 %
:RPS:PFM   509->587 PF00271 * Helicase_C 6e-07 41.9 %
:RPS:PFM   595->638 PF12344 * UvrB 9e-13 72.7 %
:RPS:PFM   676->710 PF02151 * UVR 4e-04 54.3 %
:HMM:PFM   595->638 PF12344 * UvrB 8.1e-26 70.5 44/44  
:HMM:PFM   508->588 PF00271 * Helicase_C 1.7e-18 44.7 76/78  
:HMM:PFM   56->164 PF04851 * ResIII 3.5e-12 22.9 109/184  
:HMM:PFM   676->711 PF02151 * UVR 8.8e-10 44.4 36/36  
:BLT:SWISS 39->720 UVRB_CORDI 0.0 82.8 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54424.1 GT:GENE BAF54424.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 1577910..1580072 GB:FROM 1577910 GB:TO 1580072 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54424.1 LENGTH 720 SQ:AASEQ MLARCFAAGHNVSTLWRILECMAFAAEHPVLSHSEHRPVGEIERSDDKFVVVSEFEPAGDQPAAIKELDERLDRGERDVVLMGATGTGKSATAAWLIEKQQRPTLVMAPNKTLAAQLANELRQLLPNNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINEDVERLRHSATSSLLSRRDVVVVSSVSCIYGLGTPQSYLDRSVVLNVGEEIDRDRFLRLLVDIQYERNDVGFTRGAFRVKGDTVDIIPAYEELAVRIEFFGDEIDALYYIHPLTGDTIRQVNEIRIFPATHYVAGPERMEKAVTDIKAELEVRLADLENRGKLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHIDGRGEGTAPATLIDYFPEDFLTIIDESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSAMDNRPLTWEEFDERRGQTVFMSATPGKFEIAAADGEFVEQVIRPTGLVDPKVTVKPTKGQIDDLIHEIRQRTDKDERVLVTTLTKKMAEDLTDYLLENGIRVRYLHSDIDTLQRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSTTSLIQTIGRAARNVSGEVIMYADKITDSMQYAIEETDRRREKQVAYNKEHGIDPQPLRKKIADILDQVYDNSADGAGPSASGDAAVVAKPDVSSMPAKEVQKLIDDLSAQMAAAARELKFELAGRLRDEIFELKKELRGIKDAGI GT:EXON 1|1-720:0| BL:SWS:NREP 1 BL:SWS:REP 39->720|UVRB_CORDI|0.0|82.8|680/681| COIL:NAA 34 COIL:NSEG 1 COIL:REGION 301->334| SEG 83->94|gatgtgksataa| SEG 172->187|ssllsrrdvvvvssvs| SEG 526->537|lqrvellrqlrl| SEG 647->663|sadgagpsasgdaavva| BL:PDB:NREP 1 BL:PDB:REP 46->639|1t5lA|0.0|56.7|593/595| RP:PDB:NREP 2 RP:PDB:REP 46->639|1d9xA|e-138|58.4|589/590| RP:PDB:REP 670->715|1e52A|7e-08|30.4|46/56| RP:PFM:NREP 4 RP:PFM:REP 61->164|PF04851|4e-17|41.3|104/177|ResIII| RP:PFM:REP 509->587|PF00271|6e-07|41.9|74/76|Helicase_C| RP:PFM:REP 595->638|PF12344|9e-13|72.7|44/44|UvrB| RP:PFM:REP 676->710|PF02151|4e-04|54.3|35/36|UVR| HM:PFM:NREP 4 HM:PFM:REP 595->638|PF12344|8.1e-26|70.5|44/44|UvrB| HM:PFM:REP 508->588|PF00271|1.7e-18|44.7|76/78|Helicase_C| HM:PFM:REP 56->164|PF04851|3.5e-12|22.9|109/184|ResIII| HM:PFM:REP 676->711|PF02151|8.8e-10|44.4|36/36|UVR| GO:PFM:NREP 9 GO:PFM GO:0003677|"GO:DNA binding"|PF04851|IPR006935| GO:PFM GO:0005524|"GO:ATP binding"|PF04851|IPR006935| GO:PFM GO:0016787|"GO:hydrolase activity"|PF04851|IPR006935| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| GO:PFM GO:0003677|"GO:DNA binding"|PF02151|IPR001943| GO:PFM GO:0004518|"GO:nuclease activity"|PF02151|IPR001943| GO:PFM GO:0006289|"GO:nucleotide-excision repair"|PF02151|IPR001943| RP:SCP:NREP 4 RP:SCP:REP 44->101|2yrbA1|7e-05|10.3|58/142|b.7.1.1| RP:SCP:REP 95->352|2b2nA1|2e-63|22.8|224/308|c.37.1.19| RP:SCP:REP 459->630|1c4oA2|2e-22|64.0|172/174|c.37.1.19| RP:SCP:REP 673->715|1qojA|3e-09|27.9|43/46|a.2.9.1| HM:SCP:REP 46->458|1d9xA1|6.3e-130|44.3|411/413|c.37.1.19|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 457->641|2eyqA5|4.6e-37|32.4|176/0|c.37.1.19|2/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 661->716|1e52A_|2.1e-10|41.1|56/56|a.2.9.1|2/2|C-terminal UvrC-binding domain of UvrB| OP:NHOMO 1132 OP:NHOMOORG 925 OP:PATTERN ------------------------11111111111---1111111111-1111-------------11 2111111111121111211-11111111111111111111111111111111112121111111111111111111112111111111111111111--1111111111111111111111111111111111111111111111111111111111111221111121111121111211111111111112222222222222222221222222222222122222222212222222322222212222222111112222211112221112222222222211222222222212222222222222232222222212222111211121221222222222212221211222122222222111111111112111111111111111111111111111-1111111111111111111111111111111211111111111111111111111111---------11111111111111111111221111111111111111111211111-111111111111111111111111211111111111111111111112311111111111122211121211111121111111111111111111111111111111212111111211111211111121111--11111------11111111111111111-1111111111111111111111111121111111111111111111111111-211111111111--1211111111111111111111111-111111111111111122222121111112122211111111112221-111111111111111111111111-1111222211111111111111-1-11111111111111111111111111211111 ------------------------------------------------------------------------------------------------------------2--------------------------------------------------1---1---------111--17111--1------1-----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 674 STR:RPRED 93.6 SQ:SECSTR #############################################cccccccccccccTTHHHHHHHHHHHHHTTccEEEEEEcTTccHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHcTTcEEEEEccGGGccccccEETTTTEEccccccccTHHHHHHHHHHHHTTTcccEEEEEcGGGGccccccHHHHTTcEEEEccccccTTTHHHHHHTTTcccccccccccTTccccTTccccEEcccTTcccccEEEccccccEEEcccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccTTGGGGHHHHTTccTTcccccHHHHccTTcEEEEETHHHHHHHHHHHHHHHHHHHHTTTTTTcccGGGGGcccccHHHHHHHcccEEEEcccccHHHHHHcccccEEEcccTTcccccEEEEEccTTHHHHHHHHHHHHHHTTcEEEEEcccTTHHHHHHHHHHTTTccccccccccccTTTHHHHHHHTTTcccEEEEccTTcTTcccTTEEEEEEccTTcccGGGcHHHHHHHHGGGTTcTTcEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHTTccccccccccccccccccHcccccTTGGGcccHHHHHHHHHHHTHHHHccHHHHHHHHHHHHHHHTTcHHHHHHHHHHcHHTccEEHHHcccc# DISOP:02AL 1-2,6-7,37-43,633-676,716-721| PSIPRED ccHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHcccccEEEcccccccccccHHccccccccccHHHccHHHHHHHHHHHHHHcccccEEEEccHHHHcccccHHHHHHcEEEEEEcccccHHHHHHHHHHcccEEccccccccEEEEEccEEEEEcccccccEEEEccccEEEEEEEEEcccccEEccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccccccHHHHEEcccccEEEccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHccccccccccccccccEEEEEEEHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHcccccEEEEccHHHHccccccccEEEEEccccccccccHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHcHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccc //