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Corynebacterium glutamicum R (cglu2)
Gene : BAF54478.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  496/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:192 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->154 2z99A PDBj 1e-39 61.7 %
:RPS:SCOP  22->92 1t6sA1  a.4.5.60 * 5e-14 26.8 %
:RPS:SCOP  100->157 1t6sA2  a.4.5.60 * 6e-06 41.4 %
:HMM:SCOP  11->93 1t6sA1 a.4.5.60 * 2.1e-16 37.3 %
:HMM:SCOP  94->169 1t6sA2 a.4.5.60 * 1.8e-19 53.9 %
:RPS:PFM   20->153 PF04079 * DUF387 7e-31 52.2 %
:HMM:PFM   21->178 PF04079 * DUF387 4.7e-52 46.5 157/159  
:BLT:SWISS 19->153 SCPB_MOOTA 5e-24 44.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54478.1 GT:GENE BAF54478.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 1646981..1647559 GB:FROM 1646981 GB:TO 1647559 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54478.1 LENGTH 192 SQ:AASEQ MNDFDPALISAMSLIPQTRSRMESILLVVDTPVSARTLAGVLGIDVPATEAILKEMAFELSERGSGIELRETAEGWRYYTRPENADIVEQFLLDGNQTRLSRAALETLAVVAYRQPVTRSQISAVRGVNVDGVMRTLQLRGLVKEVDVDESTGAHRYGTTELLLELLGIDSLDKLPDLAPLLPDVDSIDEDF GT:EXON 1|1-192:0| BL:SWS:NREP 1 BL:SWS:REP 19->153|SCPB_MOOTA|5e-24|44.0|134/195| SEG 158->168|gttelllellg| SEG 170->186|dsldklpdlapllpdvd| BL:PDB:NREP 1 BL:PDB:REP 22->154|2z99A|1e-39|61.7|133/160| RP:PFM:NREP 1 RP:PFM:REP 20->153|PF04079|7e-31|52.2|134/160|DUF387| HM:PFM:NREP 1 HM:PFM:REP 21->178|PF04079|4.7e-52|46.5|157/159|DUF387| RP:SCP:NREP 2 RP:SCP:REP 22->92|1t6sA1|5e-14|26.8|71/85|a.4.5.60| RP:SCP:REP 100->157|1t6sA2|6e-06|41.4|58/77|a.4.5.60| HM:SCP:REP 11->93|1t6sA1|2.1e-16|37.3|83/0|a.4.5.60|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 94->169|1t6sA2|1.8e-19|53.9|76/0|a.4.5.60|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 498 OP:NHOMOORG 497 OP:PATTERN -----------------------1-------------------------------------------- 111-111111111111111-11111111111111111111111111-111111111-1--111-1111111----11111111----------------------11-1---------------111111111-1111111---11----------------------------------------111111111111111111111111111111111111111111111111111111-111111-11111-1111111111111111111111111---11111111111111111111111111111111111111111111111111111-1-1-111----11-111-1-11-1-1111111-1-1-1111111--------11--------11111111111------1--111-----------111111111111111----------1----11-------------------------------1-11-11111111111111111111111111111111111111111111111111111111111111111111111-1-1-----------11111-111111111-----------------------------11-111-111-1111111111111111111--11111--------------------------------------------------------------------------------------------1111111---111-----------------11111111111111111111111111111-------------------------1111111111111----111111--------11-------11-11--1111-1-----1-----1---1-1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 133 STR:RPRED 69.3 SQ:SECSTR #####################HHHHHHHccccccHHHHHHHHTccHHHHHHHHHHHHHHHHHTTccEEEEEETTEEEEEEcGGGHHHHHHHHHHHHcccccHHHHHHHHHHHHHccEEHHHHHHHHTcccHHHHHHHHHTTcEEEEEEcTTTcc###################################### DISOP:02AL 1-4,6-6,8-12,14-15,189-191| PSIPRED cccccHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEcHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHcccEEEEccccccccccccccHHHHHHcccccHHHcccHHHHHHHHHHHHHcc //