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Corynebacterium glutamicum R (cglu2)
Gene : BAF54510.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  216/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.1c.80.1
:291 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   109->269 1m3sA PDBj 2e-07 25.0 %
:RPS:PDB   22->277 2cvpA PDBj 3e-17 9.7 %
:RPS:SCOP  14->72 2o3fA1  a.4.1.20 * 3e-12 30.5 %
:RPS:SCOP  110->237 1j5xA  c.80.1.1 * 4e-17 15.6 %
:HMM:SCOP  99->271 1x94A_ c.80.1.3 * 2.4e-25 32.3 %
:RPS:PFM   14->71 PF01418 * HTH_6 3e-06 34.5 %
:RPS:PFM   138->255 PF01380 * SIS 3e-08 35.6 %
:HMM:PFM   15->86 PF01418 * HTH_6 6.3e-18 37.5 72/107  
:HMM:PFM   137->257 PF01380 * SIS 1e-11 24.2 120/131  
:BLT:SWISS 13->268 Y191_CLOAB 5e-17 23.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54510.1 GT:GENE BAF54510.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(1678854..1679729) GB:FROM 1678854 GB:TO 1679729 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54510.1 LENGTH 291 SQ:AASEQ MSWHQATDAPPRIRITTLAPSLQPNQRKVAEVMLVDAPSIVELTAQGLADRVGVGRATVIRTAQSLGYDGFPQLRVALAQELALAQDASRSMVEGALSSSLLGHLQAGISDFQASLSTVASALTEDDLTRCIEGLDSARRVLVASHGLSAPLGLDFSQRLNSMGRSAEVHSDSMSEQIVARQLGEGSVCFAISGSGASKATLATIEAARAGGATIMAMTCFAHSAIDVAADVSLIVPPMTASFQDELTRTSRAALMLVSEQLIELLITHRGQEAAQARATSMSMIGTSLEE GT:EXON 1|1-291:0| BL:SWS:NREP 1 BL:SWS:REP 13->268|Y191_CLOAB|5e-17|23.9|251/283| SEG 73->88|qlrvalaqelalaqda| BL:PDB:NREP 1 BL:PDB:REP 109->269|1m3sA|2e-07|25.0|156/181| RP:PDB:NREP 1 RP:PDB:REP 22->277|2cvpA|3e-17|9.7|247/557| RP:PFM:NREP 2 RP:PFM:REP 14->71|PF01418|3e-06|34.5|58/102|HTH_6| RP:PFM:REP 138->255|PF01380|3e-08|35.6|118/131|SIS| HM:PFM:NREP 2 HM:PFM:REP 15->86|PF01418|6.3e-18|37.5|72/107|HTH_6| HM:PFM:REP 137->257|PF01380|1e-11|24.2|120/131|SIS| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01418|IPR000281| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01418|IPR000281| GO:PFM GO:0005529|"GO:sugar binding"|PF01380|IPR001347| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01380|IPR001347| RP:SCP:NREP 2 RP:SCP:REP 14->72|2o3fA1|3e-12|30.5|59/83|a.4.1.20| RP:SCP:REP 110->237|1j5xA|4e-17|15.6|128/319|c.80.1.1| HM:SCP:REP 99->271|1x94A_|2.4e-25|32.3|167/191|c.80.1.3|1/1|SIS domain| OP:NHOMO 267 OP:NHOMOORG 219 OP:PATTERN ---11--------------------------------------------------------------- --------111--------------1-------------1-12--1---1--1----1--1--1-11---1----1-----------------------------------------------------------------------------------------------------------1----11---------111----11---112---1---1-11------31------------------1-111-11-----11----------2----------------------------------------------2---2----------1----111---1---1--------------11--------------------------------------1----------1--1---------21--11--11---------------------1-----------------------------------------111111111111111111112111---------1--11-111---------1---11111-----------------------------------------------------------------1-2-----1----------------------------------21--21-1221111111-2211111111211111111131----2111111111111111111111111--222122222222-----------------1111----1111-112----------1-1111222212222-222----------111112112-1-12-------------------------------------------------------------3----------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 266 STR:RPRED 91.4 SQ:SECSTR #####################EccccEEEEEcTTccccHHHHHHHHHHHHHTTHHHHHHHHHTTccccTTTTccccHHHHHHHH####HTcTTccccEETTEEcHHHHHHHHHHHHHHHHHHHTTccccTTcccccEEEEEccGGGTHHHHHHHHHTGGGGTTccEEEEEccccHHHHHTTccTTcEEEEEEccccccHHHHHHHHHHHHHHHHHHccGGGGGGTEEEEEccHHHHHHTccGGGEEEccTTccGGGcTTTGGGHHHHHHHcHHHHHHHHHHHHHTTHHHHH DISOP:02AL 1-22,88-96,274-276,280-284,286-292| PSIPRED ccccccccccHHHHHHHHHHcccHHHHHHHHHHHHcHHHHHHccHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHccccEEEEEcccccHHHHHccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //