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Corynebacterium glutamicum R (cglu2)
Gene : BAF54559.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  629/915 : Eukaryota  86/199 : Viruses  0/175   --->[See Alignment]
a.46.1c.1.21c.1.26c.23.6d.173.1
:1221 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->605 1q7zA PDBj 1e-49 31.1 %
:BLT:PDB   670->1221 3bulA PDBj 8e-55 32.8 %
:RPS:PDB   14->629 3bolB PDBj 3e-68 27.1 %
:RPS:PDB   667->1221 3bulA PDBj 6e-52 28.7 %
:RPS:SCOP  14->324 1q7mA2  c.1.26.1 * 2e-54 31.9 %
:RPS:SCOP  369->635 1f6yA  c.1.21.2 * 5e-40 27.5 %
:RPS:SCOP  661->747 1bmtA1  a.46.1.1 * 2e-27 40.2 %
:RPS:SCOP  755->890 1bmtA2  c.23.6.1 * 2e-06 34.8 %
:RPS:SCOP  930->1221 1k7yA3  d.173.1.1 * 7e-86 26.3 %
:HMM:SCOP  14->410 1umyA_ c.1.26.1 * 3.5e-104 42.5 %
:HMM:SCOP  367->640 1f6yA_ c.1.21.2 * 7.7e-83 40.2 %
:HMM:SCOP  660->748 1bmtA1 a.46.1.1 * 1.2e-24 43.8 %
:HMM:SCOP  754->910 1bmtA2 c.23.6.1 * 1.9e-42 39.7 %
:HMM:SCOP  926->1221 1mskA_ d.173.1.1 * 1e-86 40.5 %
:RPS:PFM   26->320 PF02574 * S-methyl_trans 4e-48 43.8 %
:RPS:PFM   670->747 PF02607 * B12-binding_2 5e-21 61.5 %
:RPS:PFM   763->849 PF02310 * B12-binding 2e-14 43.0 %
:RPS:PFM   1088->1219 PF02965 * Met_synt_B12 2e-17 39.7 %
:HMM:PFM   26->320 PF02574 * S-methyl_trans 5.4e-75 39.5 286/305  
:HMM:PFM   1081->1221 PF02965 * Met_synt_B12 6.4e-46 42.2 135/136  
:HMM:PFM   368->579 PF00809 * Pterin_bind 7e-36 22.4 192/210  
:HMM:PFM   666->747 PF02607 * B12-binding_2 2.2e-30 50.0 82/84  
:HMM:PFM   761->878 PF02310 * B12-binding 2.8e-22 31.9 116/121  
:BLT:SWISS 9->1221 METH_MYCLE 0.0 66.2 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54559.1 GT:GENE BAF54559.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(1732069..1735734) GB:FROM 1732069 GB:TO 1735734 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54559.1 LENGTH 1221 SQ:AASEQ MSTSVTSPAHNNAHSSEFLDALANHVLIGDGAMGTQLQGFDLDVEKDFLDLEGCNEILNDTRPDVLRQIHRAYFEAGADLVETNTFGCNLPNLADYDIADRCRELAYKGTAVAREVADEMGPGRNGMRRFVVGSLGPGTKLPSLGHAPYADLRGHYKEAALGIIDGGGDAFLIETAQDLLQVKAAVHGVQDAMAELDTFLPIICHVTVETTGTMLMGSEIGAALTALQPLGIDMIGLNCATGPDEMSEHLRYLSKHADIPVSVMPNAGLPVLGKNGAEYPLEAEDLAQALAGFVSEYGLSMVGGCCGTTPEHIRAVRDAVVGVPEQETSTLTKIPAGPVEQASREVEEEDSVASLYTSVPLSQETGISMIGERTNSNGSKAFREAMLSGDWETCVDIAKQQTRDGAHMLDLCVDYVGRDGTADMATLAALLATSSTLPIMIDSTEPEVIRTGLEHLGGRSIVNSVNFEDGDGPDSRYQRIMKLVKQHGAAVVALTIDEEGQARTAEHKVRIAKRLIDDITGSYGLDIKDIVVDCLTFPISTGQEETRRDGIETIEAIRELKKLYPEIHTTLGLSNISFGLNPAARQVLNSVFLNECIEAGLDSAIAHSSKILPMNRIDDRQREVALDMVYDRRTEDYDPLQEFMQLFEGVSAADAKDARAEQLAAMPLFERLAQRIIDGDKNGLEDDLEAGMKEKSPIAIINEDLLNGMKTVGELFGSGQMQLPFVLQSAETMKTAVAYLEPFMEEEAEATGSAQAEGKGKIVVATVKGDVHDIGKNLVDIILSNNGYEVVNLGIKQPLSAMLEAAEEHKADVIGMSGLLVKSTVVMKENLEEMNNAGASNYPVILGGAALTRTYVENDLNEVYTGEVYYARDAFEGLRLMDEVMAEKRGEGLDPNSPEAIEQAKKKAERKARNERSRKIAAERKANAAPVIVPERSDVSTDTPTAAPPFWGTRIVKGLPLAEFLGNLDERALFMGQWGLKSTRGNEGPSYEDLVETEGRPRLRYWLDRLKSEGILDHVALVYGYFPAVAEGDDVVILESPDPHAAERMRFSFPRQQRGRFLCIADFIRPREQAVKDGQVDVMPFQLVTMGNPIADFANELFAANEYREYLEVHGIGVQLTEALAEYWHSRVRSELKLNDGGSVADFDPEDKTKFFDLDYRGARFSFGYGSCPDLEDRAKLVELLEPGRIGVELSEELQLHPEQSTDAFVLYHPEAKYFNV GT:EXON 1|1-1221:0| BL:SWS:NREP 1 BL:SWS:REP 9->1221|METH_MYCLE|0.0|66.2|1197/1206| COIL:NAA 28 COIL:NSEG 1 COIL:REGION 902->929| SEG 162->169|giidgggd| SEG 425->437|atlaallatsstl| SEG 899->919|eaieqakkkaerkarnersrk| BL:PDB:NREP 2 BL:PDB:REP 22->605|1q7zA|1e-49|31.1|524/559| BL:PDB:REP 670->1221|3bulA|8e-55|32.8|516/577| RP:PDB:NREP 2 RP:PDB:REP 14->629|3bolB|3e-68|27.1|546/549| RP:PDB:REP 667->1221|3bulA|6e-52|28.7|509/577| RP:PFM:NREP 4 RP:PFM:REP 26->320|PF02574|4e-48|43.8|281/296|S-methyl_trans| RP:PFM:REP 670->747|PF02607|5e-21|61.5|78/84|B12-binding_2| RP:PFM:REP 763->849|PF02310|2e-14|43.0|86/117|B12-binding| RP:PFM:REP 1088->1219|PF02965|2e-17|39.7|126/137|Met_synt_B12| HM:PFM:NREP 5 HM:PFM:REP 26->320|PF02574|5.4e-75|39.5|286/305|S-methyl_trans| HM:PFM:REP 1081->1221|PF02965|6.4e-46|42.2|135/136|Met_synt_B12| HM:PFM:REP 368->579|PF00809|7e-36|22.4|192/210|Pterin_bind| HM:PFM:REP 666->747|PF02607|2.2e-30|50.0|82/84|B12-binding_2| HM:PFM:REP 761->878|PF02310|2.8e-22|31.9|116/121|B12-binding| GO:PFM:NREP 10 GO:PFM GO:0008898|"GO:homocysteine S-methyltransferase activity"|PF02574|IPR003726| GO:PFM GO:0008705|"GO:methionine synthase activity"|PF02607|IPR003759| GO:PFM GO:0009086|"GO:methionine biosynthetic process"|PF02607|IPR003759| GO:PFM GO:0031419|"GO:cobalamin binding"|PF02607|IPR003759| GO:PFM GO:0046872|"GO:metal ion binding"|PF02607|IPR003759| GO:PFM GO:0031419|"GO:cobalamin binding"|PF02310|IPR006158| GO:PFM GO:0046872|"GO:metal ion binding"|PF02310|IPR006158| GO:PFM GO:0005622|"GO:intracellular"|PF02965|IPR004223| GO:PFM GO:0008705|"GO:methionine synthase activity"|PF02965|IPR004223| GO:PFM GO:0009086|"GO:methionine biosynthetic process"|PF02965|IPR004223| RP:SCP:NREP 5 RP:SCP:REP 14->324|1q7mA2|2e-54|31.9|288/300|c.1.26.1| RP:SCP:REP 369->635|1f6yA|5e-40|27.5|251/258|c.1.21.2| RP:SCP:REP 661->747|1bmtA1|2e-27|40.2|87/90|a.46.1.1| RP:SCP:REP 755->890|1bmtA2|2e-06|34.8|135/156|c.23.6.1| RP:SCP:REP 930->1221|1k7yA3|7e-86|26.3|278/327|d.173.1.1| HM:SCP:REP 14->410|1umyA_|3.5e-104|42.5|358/0|c.1.26.1|1/1|Homocysteine S-methyltransferase| HM:SCP:REP 367->640|1f6yA_|7.7e-83|40.2|261/0|c.1.21.2|1/1|Dihydropteroate synthetase-like| HM:SCP:REP 660->748|1bmtA1|1.2e-24|43.8|89/90|a.46.1.1|1/1|Methionine synthase domain| HM:SCP:REP 754->910|1bmtA2|1.9e-42|39.7|156/156|c.23.6.1|1/1|Cobalamin (vitamin B12)-binding domain| HM:SCP:REP 926->1221|1mskA_|1e-86|40.5|284/327|d.173.1.1|1/1|Methionine synthase activation domain-like| OP:NHOMO 1154 OP:NHOMOORG 734 OP:PATTERN ----1-----------2------2--------14---12111-11----8EAC-----------1-22 33511-11111-1-11111-111111111111111111111111----1-1--11-----111-1111111----------31--11-443311-----2-2-21221-1---------------1111111111111111---2111111111111111111111111121111111111111111122-1212222222222222222222212222222---11111122-1111111111111111111-------1---11-----1-------111-----11----------------------------------46122222222212143221111112-112121Pc3212211D11141112112222-----111111111111111111111111121111111142-41111141114411222222444454311111111111111-1------------------------------22222111112222222-222222222222222222222222222222222222111111111-------111111-6952221111111-232122222111113211-------------------11-11--1112111--211111111111111111111---1111------111111-1111111111-111111111111111111111111--1111111111111111111111111--111111111111---1---------11111----11---------11111-11111111111111111111111---------1111111111111112222222222-----112111111------------------------------------1-11111111131 ----111-21----1----------------------------------------------------------------------------------------111-131311111-1111111121213A1-124111111111112112112121121171311------131-111H1113-1--1---1121212 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1198 STR:RPRED 98.1 SQ:SECSTR #############cHHHHHHHHHHccEEcccccHHHHGGGTccHHHTccccGccGGGHHHHcHHHHHHHHHHHHHHTccEEEcccTTccHHHHGGGTcGGGHHHHHHHHHHHHHHHHTT########TcEEEEEEccccccTTTccccHHHHHHHHHHHHHHHHHHTcccEEEEEEccHHHHHHHHHHHHHHHHHHcccccEEEEEcccTTcccTTcccHHHHHHHHHTccccEEEEEccccHHHHHHHHHHHHTTcccEEEEEccccccEEETTEEEccccHHHHHTTHHHHHHTTTccEEcccTTccHHHHHHHHHHHccccccccccccccEHcEHccccccccccccccEEEccccEEEccccEEEEEEEccTTcHHHHHHHHTTccHHHHHHHHHHHHTTccEEEEEcccGGGccHHHHHHHHHHHHHHTcccEEEEcccHHHHHHHHHHcccccEEEEEEccHHHHEETTHHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHHHHHHHHTHTTcTGTcEEEEcccccGGGTccHHEEcHHHHHHHHHHHHHTTTTccccccGGGTTcTcccccHHHHHHHHHHHHHHTTccEEEEcTTcHHHHHHHHHHHHHTTccccTTccTTTccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHTccTTHHHHHHHHHHcccTTHHHHTHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHTcccccccccEEEEEEcTTEEcccccccHHHHHHHHHHHTTTcEEEEccccccHHHHHHHHHHHTccEEEEEcccTHHHHHHHHHHHHHHHTTcccccEEEEcTTccHHHHHHHTGGGccccEEEcccHHHHHHHHHHHTcTTTHHHHHHHHHHHHHHHHHHTTccTTccccccHHHHHcTTccccccHHHTcccccGGGcccccccccEEEEEcHHHHHTTcccHHHHHHTTcHHHHHHHHHHHHHHHHHHHTccccEEEHHHHHHHTccccEEEEEEEEEEEEETTEEEEEccTTcccEEEEEEEcccccccccccGGGGcccGGGccGGTccEEEEEEEEEccTTHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTccTc##cccTTccccHHTTccccccccTTcTTcccGGGHHHHHHHHTHHHHccEEcTTccEEcccEEEEEEcccTTcccccc DISOP:02AL 1-15,645-663,745-759,906-928| PSIPRED ccccccccccccccHHHHHHHHHcccEEEEcHHHHHHHHccccccccccccccccHHHccccHHHHHHHHHHHHHHcccEEEcccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHccccEEEEccccccEEccccEEEcccHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccHHHEEEEccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEcHHHccHHHcccHHHHHHHHHHHHcccHHHcccHHHHHHHHccccccccHHHcccccccccHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHcccccccccEEEEccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccccEEEccccHHHHHHHHccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEcccccEEEEcccccccEEEEEEccccccccccEEEHEEcccHHHccccccccEEEEEEEccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccccccHHHHHHHHHHcccccccEEEcHHHHccccccEEEEEEEccccccccc //