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Corynebacterium glutamicum R (cglu2)
Gene : BAF54600.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  47/915 : Eukaryota  45/199 : Viruses  0/175   --->[See Alignment]
b.1.18b.68.1
:909 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->504 1eutA PDBj e-113 46.9 %
:RPS:PDB   46->389 2bq9A PDBj 3e-14 53.2 %
:RPS:PDB   418->550 2a73B PDBj 2e-04 16.2 %
:RPS:PDB   671->819 2dhhA PDBj 3e-04 14.1 %
:RPS:SCOP  46->408 1eurA  b.68.1.1 * 4e-84 54.5 %
:RPS:SCOP  414->504 1eutA1  b.1.18.2 * 2e-10 19.8 %
:HMM:SCOP  49->409 1so7A_ b.68.1.1 * 2.2e-88 36.5 %
:RPS:PFM   418->488 PF10633 * NPCBM_assoc 3e-05 42.3 %
:HMM:PFM   102->110 PF02012 * BNR 0.00098 66.7 9/12  
:HMM:PFM   288->297 PF02012 * BNR 0.00016 80.0 10/12  
:HMM:PFM   418->488 PF10633 * NPCBM_assoc 1.1e-11 38.6 70/78  
:HMM:PFM   895->908 PF08183 * SpoV 0.00044 42.9 14/26  
:BLT:SWISS 44->504 NANH_MICVI e-113 46.9 %
:BLT:SWISS 595->814 EFTS_RHORT 2e-04 28.4 %
:TM
:REPEAT 2|653->709|762->820
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54600.1 GT:GENE BAF54600.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(1783436..1786165) GB:FROM 1783436 GB:TO 1786165 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54600.1 LENGTH 909 SQ:AASEQ MSRRKAVFSALGAAALIGAALPTIPTAQAQTPTGYGFDATASIGEEPEFSTQQLADGGTLGFDCYRIPSLGVAPNGNVLASWDGRPNNCSDAPQPNSIVGKVSTDNGATWGEQHDISAGITAEPKTGYSDPSIVVDWERGDVFNFHVKSFDAGYFTSQPGTDPDDRNVAHVAYAKSSDNGSTWVADTVITDQVVADDTWDSRFATSGNGIQLQYGAYKGRLVQPSVTRMTNGRVAAVAMLSDDHGTTWYPSAPWGNSMDENKIVELSDGTLMNNSRSSGADTYRKVSYSTDGGVTWTEPTLDTQLPDPRNNASLIRVFPTAPEGSAQAKVLLFSNTATTSGRTNGTVRMSCDDGQTWPVSKVFEPGAIQYTSMATLPNGDIGMLWENSGSNIDIFYSQFNLSWLEAGCIGVDADETPVTAGETTTMNVTLTNPFANAIFDRAVSLELPEGWQAEDVRVSIPSGESVTIPVQVTAPLVADNGELPVEVSILDGADRYTGRLNLTVQGGQEPASTSVKVSIPNLKDTYVAGEKISINFAVNNPFDVTVNSVPSLGEGENWMPANLRGFDPEQGAPNCRYRNLGANQSYNCTTTTYEVSDSDVERGYVDIPTVWTFTNSAGETVWSKNVDVPRIELNGTQDAVTDAIVTVDPINPVHSNGQSQTVEVQANVTSEGDLPAGSKVAFYLDSSPIDAAAVDAEGHASISIDVDNIASEQPERTFEVRARLVVPEDAPRSIARDALARFTVLPEQVQQNSLVIMNHPDVVSDGQTKTIVIAVKATAHDGSPVAIGTLITFRVNGIERDVVPTNAQGTAKLQLDLKPVNTEDEEYEVTVEAELDELTAQTTFKVLAGEEEEPTSTEEQPSETEQPSEPEEEPTAPTGSSNGGSFAALLALLAALGGIVGAVLGLLKL GT:EXON 1|1-909:0| BL:SWS:NREP 2 BL:SWS:REP 44->504|NANH_MICVI|e-113|46.9|456/647| BL:SWS:REP 595->814|EFTS_RHORT|2e-04|28.4|211/309| TM:NTM 2 TM:REGION 6->28| TM:REGION 885->907| NREPEAT 1 REPEAT 2|653->709|762->820| SEG 10->33|algaaaligaalptiptaqaqtpt| SEG 822->837|tedeeyevtveaelde| SEG 848->881|ageeeeptsteeqpseteqpsepeeeptaptgss| SEG 883->908|ggsfaallallaalggivgavlgllk| BL:PDB:NREP 1 BL:PDB:REP 46->504|1eutA|e-113|46.9|454/601| RP:PDB:NREP 3 RP:PDB:REP 46->389|2bq9A|3e-14|53.2|342/601| RP:PDB:REP 418->550|2a73B|2e-04|16.2|130/976| RP:PDB:REP 671->819|2dhhA|3e-04|14.1|142/1022| RP:PFM:NREP 1 RP:PFM:REP 418->488|PF10633|3e-05|42.3|71/78|NPCBM_assoc| HM:PFM:NREP 4 HM:PFM:REP 102->110|PF02012|0.00098|66.7|9/12|BNR| HM:PFM:REP 288->297|PF02012|0.00016|80.0|10/12|BNR| HM:PFM:REP 418->488|PF10633|1.1e-11|38.6|70/78|NPCBM_assoc| HM:PFM:REP 895->908|PF08183|0.00044|42.9|14/26|SpoV| RP:SCP:NREP 2 RP:SCP:REP 46->408|1eurA|4e-84|54.5|358/361|b.68.1.1| RP:SCP:REP 414->504|1eutA1|2e-10|19.8|91/103|b.1.18.2| HM:SCP:REP 49->409|1so7A_|2.2e-88|36.5|351/0|b.68.1.1|1/1|Sialidases| OP:NHOMO 155 OP:NHOMOORG 92 OP:PATTERN -------------------------------------------------------------------- --1---2-332-1---------------------------------2-----222--------2--2321-----2------------3311-111----1------1-6-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------111----1121111111-------------------------------------------22------------------------------3-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------1--------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------2 ------3--------------1----1--------1----------------1----11-------------------------------------------------1-E11222-1--1-1-11111841-112-1-11-1211111-1-11---22----1---------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 647 STR:RPRED 71.2 SQ:SECSTR #############################################cccEEEEEEEETTcTTccEEEEEEEEEcTTccEEEEEEEETTcccTETcccEEEEEEETTccccccccEEEEcccccccccEEEEEEEEEcTTTccEEEEEEEEcccccccccccccTTcccccEEEEEEEccccEcccEEEEcGGGccccTTccEEEEccEEcEEccccTTTTcEEEEEEEEcTTccEEEEEEEEccTTcccEEccccccccccEEEEEcTTccEEEEEccTTcccEEEEEEEccTTccccccEEEEEEEccccccEEEEccTTccTTcTGGGcEEEEEEccccccEEEEEEEEccTTccccEEEEEEEEEcccEEEEEcTTccEEEEEccccTTEEEEEccTTcccEEcTTcTTTcEEEEEEEEcEEEEEEEEEEccccccEEEEEEEcccTTcccEEEEEEEcTTEEEEEEEEEEEccccccEEEEEEEEEEEcccccEEEEEEEEEEEcccEEEEEEEEccEEcTcTTTccccEEEcccccTTccTTcccE########################################################################################################################cccccccEEEEEEccccc#cTTHHHH#####HHHHHHHHHHccGGGccccEEcccccEcccccccHHHHHHTTccHHHHHH#HHHHHHHccccccccEEEccccccGEcTTccEEEGGGcccccccEEccEEEEETTEEEEEEEEcccc########################################################################################## DISOP:02AL 1-4,849-883| PSIPRED cccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEccccccccEEEEEEEEEcccccEEEEEccccccccccccccEEEEEEEEccccccccEEEEEccccccccccccccEEEEEcccccEEEEEEccccccEEcccccccccccEEEEEEEEEEccccccccccEEcccccccccccEEEEEcccccEEEccccccccEEEEEEEEEccccEEEEEEEEcccccccEEcccccccccccEEEEEcccEEEEEEEcccccEEEEEEEEccccccccccEEcccccccccccEEEEEEccccccccccEEEEEEccccccccccEEEEEEccccEEccccEEEccccccccEEEEccccEEEEEEEcccccEEEEEEEccHHHHccccccccccccccccccccEEEEEEEcccccccccccEEEEcccccEEEcccccccccccEEEEEEEEcccccccccEEEEEEEEccccEEEEEEEEEEEEccccccccEEEEEcccccccccccEEEEEEEEEcccccEEEEEEEcccccccccccccccccHHcccccccccccccccccccEEEEEEcHHHHcccEEEEEEEEEEccccccEEEEcccEEEEEEEcccEEEEcccEEEEcccccccccccEEEEEEEEccccccccccccEEEEEcccccHHHHEEcccccEEEEEEEccccccccEEEEEEEEEEEccccccEEEEEccccEEEEEcccccccEEEEEccccEEccccEEEEEEEEEEccccccEEEEEEEEEEEEccEEEEccccccccEEEEEEEEEcccccccEEEEEEEEEHHHHHccEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc //