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Corynebacterium glutamicum R (cglu2)
Gene : BAF54639.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  745/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
a.79.1c.66.1
:503 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   82->443 1sqgA PDBj 5e-33 32.0 %
:RPS:PDB   67->195 3d3bA PDBj 1e-25 19.4 %
:RPS:PDB   241->502 2as0A PDBj 6e-16 14.3 %
:RPS:SCOP  69->200 1tztA  a.79.1.1 * 1e-19 17.4 %
:RPS:SCOP  212->502 1ixkA  c.66.1.38 * 6e-41 26.4 %
:HMM:SCOP  66->219 1sqgA1 a.79.1.3 * 6.8e-35 32.1 %
:HMM:SCOP  202->503 1ixkA_ c.66.1.38 * 3.3e-51 34.2 %
:RPS:PFM   69->188 PF01029 * NusB 9e-12 36.4 %
:RPS:PFM   280->500 PF01189 * Nol1_Nop2_Fmu 2e-33 39.8 %
:HMM:PFM   241->501 PF01189 * Nol1_Nop2_Fmu 1.6e-48 33.7 255/283  
:HMM:PFM   67->190 PF01029 * NusB 3.7e-28 30.6 124/134  
:BLT:SWISS 73->502 Y1407_MYCTU e-105 48.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54639.1 GT:GENE BAF54639.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(1832148..1833659) GB:FROM 1832148 GB:TO 1833659 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54639.1 LENGTH 503 SQ:AASEQ MSLEKSGGFRSRTPKAQQEPAKQKPQARKSPSKKVPARGQGQSSGKGGGNRKPSAQAREVRALGVDKPREIAFEVLDRVRTGEAYANLVLPRLLSKHNLSGRDAAFATEITYGTLRNVGLLDEVIKAASGRELSDIDPEVLDVLRLGAYQVMFTRVEDHAAVDTSVKMVGGLKKFQATGFANAILRNITRKEPEQWLKELEPTEELARVAFRTAHPRWIAQSFSQVLPADELEAALAADSERPVVHLVARPGEISAEELALITGGDEGKYSPYAVYLEGGDPGDIEPVKDGLAAVQDEGSQLIARALVEIPVEGTDAGRWLDMCAGPGGKAALIGALARMDRATVDAVEVSDHRARLIEKSVRGLPVKVHVGDGRTINLTGGYDRALVDAPCSGLGALRRRPEARWRKQESDIVELNTLQYELLESAVNKVRSGGVIVYSTCSPDLRETRGIVDKALGALEIEELEAAEFMPGMTDTGDEKSVQMWPHRHGTDAMFVAVLRKK GT:EXON 1|1-503:0| BL:SWS:NREP 1 BL:SWS:REP 73->502|Y1407_MYCTU|e-105|48.7|429/457| SEG 14->27|pkaqqepakqkpqa| SEG 39->49|gqgqssgkggg| SEG 229->239|adeleaalaad| SEG 456->469|algaleieeleaae| BL:PDB:NREP 1 BL:PDB:REP 82->443|1sqgA|5e-33|32.0|344/424| RP:PDB:NREP 2 RP:PDB:REP 67->195|3d3bA|1e-25|19.4|129/139| RP:PDB:REP 241->502|2as0A|6e-16|14.3|237/382| RP:PFM:NREP 2 RP:PFM:REP 69->188|PF01029|9e-12|36.4|118/124|NusB| RP:PFM:REP 280->500|PF01189|2e-33|39.8|211/229|Nol1_Nop2_Fmu| HM:PFM:NREP 2 HM:PFM:REP 241->501|PF01189|1.6e-48|33.7|255/283|Nol1_Nop2_Fmu| HM:PFM:REP 67->190|PF01029|3.7e-28|30.6|124/134|NusB| GO:PFM:NREP 2 GO:PFM GO:0003723|"GO:RNA binding"|PF01029|IPR006027| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01029|IPR006027| RP:SCP:NREP 2 RP:SCP:REP 69->200|1tztA|1e-19|17.4|132/141|a.79.1.1| RP:SCP:REP 212->502|1ixkA|6e-41|26.4|276/305|c.66.1.38| HM:SCP:REP 66->219|1sqgA1|6.8e-35|32.1|140/140|a.79.1.3|1/1|NusB-like| HM:SCP:REP 202->503|1ixkA_|3.3e-51|34.2|295/0|c.66.1.38|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 1572 OP:NHOMOORG 980 OP:PATTERN 221125222222222322---1131--11111---11-11111-----1----75555554---11-- 111-111111111111111-11--111111111111111111111111111-111111--11111111111-------1111------------11---1111112211-1111111-111111111111111121--------1-11111111111111111111-11111111111111111-11111-12111111111111111111111111122211111111112311111111111111111111122222221221122221222211112222222222222222222222222222222222222222222121111111111111122111111212112221111121111112222-1111-222222122212222222222222222122222-2212222222222222222222223322212212222222222222211221222------------------------------222222111122222222222222222222222222222222121222222221222222222222222222222221111211112111111111211133334-11---1---------------------11332111111224544444444444444444--1121-------22221222222222222-2222222222222222222222221112222222222222222222221221-111111111111--11111111111111111111-11111-11111111111---121111111111111111111-1--1-1122222222222233-11111111111111-2----------------------1---1--------1----------111-111-31 221111414111112111-11111111111111111111111111111111111111111111111111111111-111111111111-1111111222211111112623232241212323-421324E3-316211-3-332-1-2131131533321121111312311213122H3331122231322321111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 445 STR:RPRED 88.5 SQ:SECSTR ###################################################ccHHHHHH#######HHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccTTccHHHHHHHHHHHHHTHHHHHHHHGGGGTTccccccHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHccTTHHHHHHHHHHHHHHHcTTcTTEEEEEETTEEEEEEccHHHHHTHHHHHHHHHHHHHHHHHHHHHHcTTccEEEEEEccHHHHHTcEEEEEEEccccEEEEEETTEEEEEEccEcccccccTTHHHHHHHGGGccTTcHcTTcEEEETTcTTTHHHHHTTcTccccHcEEEEEEccHHHHHHHHHHHHTcGGGEEEEccHHHHHHHHHTTccEEEEEETcccccccccccccccGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEccTTccHHHHHHHHHHHHTTEEEEccccccccTcEEEETccccTcGGGcccEEEEEEEEEcc DISOP:02AL 1-67| PSIPRED ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHccHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHcccccccccEEEEEccccccccHHHHccEEEEEcHHHHHHHHHHHHcccccccccEEEEccccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHcccEEEEcccccccccccccEEEEccccccccEEcccccHHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHcccEEcccccccccccccccccEEEEcccccccccEEEEEEEEc //