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Corynebacterium glutamicum R (cglu2)
Gene : BAF54670.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  579/915 : Eukaryota  98/199 : Viruses  0/175   --->[See Alignment]
c.2.1c.58.1
:276 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->270 2eggA PDBj 6e-25 31.0 %
:RPS:PDB   8->271 2cy0A PDBj 3e-51 34.0 %
:RPS:SCOP  6->105 1npdA2  c.58.1.5 * 7e-30 33.3 %
:RPS:SCOP  126->269 1npyA1  c.2.1.7 * 2e-29 27.7 %
:HMM:SCOP  1->105 1nvtA2 c.58.1.5 * 5.2e-29 38.5 %
:HMM:SCOP  106->271 1npyA1 c.2.1.7 * 6e-30 38.9 %
:RPS:PFM   11->93 PF08501 * Shikimate_dh_N 3e-15 48.8 %
:RPS:PFM   126->227 PF01488 * Shikimate_DH 3e-09 38.0 %
:HMM:PFM   11->93 PF08501 * Shikimate_dh_N 9e-26 41.5 82/83  
:HMM:PFM   122->197 PF01488 * Shikimate_DH 9.2e-14 39.2 74/135  
:BLT:SWISS 11->266 ARO1_YEAST 2e-30 34.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54670.1 GT:GENE BAF54670.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(1863059..1863889) GB:FROM 1863059 GB:TO 1863889 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54670.1 LENGTH 276 SQ:AASEQ MGSHITHRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETYRGFSVTMPSKFAALEFADEVTERARAIGSANTLLRTETGWRADNTDVDGIRGALGELLGSASLAGKHAIVIGSGGTARPAIWALIEAGVARITVLNRSDRTAELQTLFDETPTTLAYAPLEHLDIEADVVVSTVPSAAIAGLEDTLAIAPVLDVIYDPWPTPLVEVARAKGLKAVGGHVMLAHQSYGQFEQFTGMDAPRDAMREALEESLGISEEH GT:EXON 1|1-276:0| BL:SWS:NREP 1 BL:SWS:REP 11->266|ARO1_YEAST|2e-30|34.0|253/1588| SEG 112->125|galgellgsaslag| BL:PDB:NREP 1 BL:PDB:REP 4->270|2eggA|6e-25|31.0|261/278| RP:PDB:NREP 1 RP:PDB:REP 8->271|2cy0A|3e-51|34.0|253/262| RP:PFM:NREP 2 RP:PFM:REP 11->93|PF08501|3e-15|48.8|82/83|Shikimate_dh_N| RP:PFM:REP 126->227|PF01488|3e-09|38.0|100/115|Shikimate_DH| HM:PFM:NREP 2 HM:PFM:REP 11->93|PF08501|9e-26|41.5|82/83|Shikimate_dh_N| HM:PFM:REP 122->197|PF01488|9.2e-14|39.2|74/135|Shikimate_DH| GO:PFM:NREP 3 GO:PFM GO:0004764|"GO:shikimate 5-dehydrogenase activity"|PF01488|IPR006151| GO:PFM GO:0005737|"GO:cytoplasm"|PF01488|IPR006151| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01488|IPR006151| RP:SCP:NREP 2 RP:SCP:REP 6->105|1npdA2|7e-30|33.3|99/106|c.58.1.5| RP:SCP:REP 126->269|1npyA1|2e-29|27.7|137/167|c.2.1.7| HM:SCP:REP 1->105|1nvtA2|5.2e-29|38.5|104/110|c.58.1.5|1/1|Aminoacid dehydrogenase-like, N-terminal domain| HM:SCP:REP 106->271|1npyA1|6e-30|38.9|157/0|c.2.1.7|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 889 OP:NHOMOORG 703 OP:PATTERN ---1---1------------------------11111111111-1---1111-1-1-11---11--11 --1-111311111111111-121112111111112111211113111111123221111111111111111111111111-1-11111----------------1---1----------------11--11-1-11----11111-1111111111111111111111111111111111111--111-1-113111111111111111111111111-1111-122211211111111111111111-11111---11---1-33--1----11-------1---1--111111111112222222222222-11111111111111111111111112221111-1----111-111111111-1111--1111-11-111112-2111111111111111111111-11-1111121--122121121111111111111111111--------111----1-----------------------------11111-------------------2---------11111------1----------1-11111-11111111-1--1-1-11111111-11-1---111111111--11-1111111111-1-------1111111--11-1--1-1-1111111---1-11-11-----1-1--------1-1112222222222-2222322232222222223443--1-1111-2212122-1--2-1222222--122222212222---1-----11111-111---111-22211--11111111--12-11112211-2323-111---------1111---------11111111111------11-111111----------1-----------------------------------11- ------1-----111333113314454--11111111--111----1212433312312121112111-21111211-111-111111-12231111111231111-11--------------------------------------------------------------------11D-----1-12211--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 272 STR:RPRED 98.6 SQ:SECSTR ccccccEEEEEEEcccTTccHHHHHHHHHHHTTccEcEEEEEEccTTcHHHHHHHHHHHccEEEEcTTcTTTTGGGccEEcHHHHHHTcccEEEEETTEEEEEccHHHHHHHHHHHTTccccccTTTEEEEcccHHHHHHHHHHHHTTTccEEEEcccHHHHHHHHHHTcEEccGEEccGGGGGGGccEEEEcccTTcccccGGGccccEEEEccccccccHHHHHHHHTTcEEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcc#### DISOP:02AL 1-4,273-277| PSIPRED cccccccEEEEEccHHHHcccHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccHHHHHcccccEEEEEccEEEEEcccHHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccccEEEcHHHHHHHHcccEEEEcccccccccHHHcccccEEEEEcccccccHHHHHHHHcccEEEccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccc //