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Corynebacterium glutamicum R (cglu2)
Gene : BAF54696.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  553/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.35.1
:403 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  189->327 1iwgA7  f.35.1.1 * 3e-08 10.6 %
:HMM:SCOP  94->334 1iwgA8 f.35.1.1 * 2.4e-24 19.5 %
:RPS:PFM   184->328 PF02355 * SecD_SecF 2e-17 34.3 %
:HMM:PFM   143->329 PF02355 * SecD_SecF 4.3e-54 43.0 179/189  
:HMM:PFM   56->79 PF07549 * Sec_GG 2.9e-06 25.0 24/29  
:BLT:SWISS 10->368 SECF_MYCTU 1e-74 45.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54696.1 GT:GENE BAF54696.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(1896026..1897237) GB:FROM 1896026 GB:TO 1897237 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54696.1 LENGTH 403 SQ:AASEQ MTDSQTESLSTQSVKPAKKRSWFNSLYTGDGGIDFIAKTKLWYWITGILLVISILFIAIRGFSLSIDFQGGTKMSMPASDYSTEQVEETFTEATGITPEIVQIVGSGDARTLEIHSERLSDEDVEKARLAIYEEYQPLNSEGQPSPDAIGNSTVSESWGSTITKRMVLALIAFLVIAAIYIAFRLEREMAIAAMAALVVDGIVIAGIYAVIGFEVSPATVIGLLTVLTFSIYDTVVVFDKVRENTEGFEGSRRRTYAEQANLAVNQTFMRSISTTIISALPIIALMVVAVWMMGVGTLKDLALIQLIGVIEGTFSSVFLATPLLVSLKNRLSKTKAHTASVMKLRDGQSTLIDATPQPNADASAHGTESDTDGVTPEAPAKRTVSKPIVDDHRSSGTWRPGRS GT:EXON 1|1-403:0| BL:SWS:NREP 1 BL:SWS:REP 10->368|SECF_MYCTU|1e-74|45.9|353/442| TM:NTM 6 TM:REGION 45->67| TM:REGION 166->188| TM:REGION 190->212| TM:REGION 219->240| TM:REGION 271->293| TM:REGION 304->326| SEG 167->183|vlaliaflviaaiyiaf| SEG 198->212|vvdgiviagiyavig| RP:PFM:NREP 1 RP:PFM:REP 184->328|PF02355|2e-17|34.3|137/185|SecD_SecF| HM:PFM:NREP 2 HM:PFM:REP 143->329|PF02355|4.3e-54|43.0|179/189|SecD_SecF| HM:PFM:REP 56->79|PF07549|2.9e-06|25.0|24/29|Sec_GG| GO:PFM:NREP 3 GO:PFM GO:0008565|"GO:protein transporter activity"|PF02355|IPR003335| GO:PFM GO:0015627|"GO:type II protein secretion system complex"|PF02355|IPR003335| GO:PFM GO:0015628|"GO:protein secretion by the type II secretion system"|PF02355|IPR003335| RP:SCP:NREP 1 RP:SCP:REP 189->327|1iwgA7|3e-08|10.6|132/199|f.35.1.1| HM:SCP:REP 94->334|1iwgA8|2.4e-24|19.5|215/223|f.35.1.1|1/1|Multidrug efflux transporter AcrB transmembrane domain| OP:NHOMO 572 OP:NHOMOORG 553 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111-111111111111111121--------1111--1111111-1111---111---11----------111111-1--11---1-1----111111111111111111-----11-11111------------11111--1111111111111111111-11111111111111-1111111111111111111111111111----------------------------------------------------------------------11-1111111111111-111111111--1-11111111111111111-11111-1111----11-----------22222222221-111111111-1-2--11111111111-2111-----11111111111-1-11-11---11111-111-1------1--------111-1-----------------------------------------1-------1------11111-----1-11--11-1-11111-111-2111---111111111-----111111---------------11--11--1-----111112-1111-2--111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--111111111111----11111-1----1111111-111---11----11-1----1-111111111111111111111122111--1111-11111111--1111111111-11-1----------------------------111-111111-11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4,8-20,114-129,332-404| PSIPRED ccccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccEEEEEEccccccHHHHHHHHHHccccccEEEEEccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcHHHHHHHHHHHHHHHcccEEEEHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccHHHHHHccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccc //