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Corynebacterium glutamicum R (cglu2)
Gene : BAF54724.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  330/915 : Eukaryota  55/199 : Viruses  0/175   --->[See Alignment]
a.132.1a.60.8c.55.3
:403 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->389 3cymA PDBj 2e-59 36.3 %
:RPS:PDB   5->396 3cymA PDBj 3e-27 32.4 %
:RPS:SCOP  25->197 1wwmA1  a.132.1.3 * 2e-26 22.8 %
:RPS:SCOP  208->299 2hbjA1  a.60.8.4 * 9e-15 22.5 %
:HMM:SCOP  15->221 2hbjA2 c.55.3.5 * 5.7e-48 37.4 %
:HMM:SCOP  201->313 2cprA1 a.60.8.4 * 1.1e-20 29.5 %
:RPS:PFM   37->172 PF01612 * 3_5_exonuc 4e-07 35.6 %
:RPS:PFM   226->275 PF00570 * HRDC 2e-04 36.0 %
:HMM:PFM   28->180 PF01612 * 3_5_exonuc 8.6e-30 32.0 150/174  
:HMM:PFM   225->277 PF00570 * HRDC 4.2e-15 34.0 53/68  
:BLT:SWISS 13->308 RND_HAEIN 4e-14 28.7 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54724.1 GT:GENE BAF54724.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 1921242..1922453 GB:FROM 1921242 GB:TO 1922453 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54724.1 LENGTH 403 SQ:AASEQ MVSDLLQPRDGIPPLLSTPGEFTAAADLLASGTGPFAIDTERASGFRYDDRAFLIQIRRRGSGTLLFDPEQFRPELTQALKPVLNGQEWIIHAASTDLPSLAWLDLHPGLLFDTELAGRLAGFDHVNLAAMVEQIFDLHLLKGHGSEDWSKRPLPESWLNYAALDVEMLLELADVMAEILDQQGKLPWAEQEFVHIVDQFATMTEPAETSWQDLKGLSTLKRPDQLVVAREMWLERDSFAASRDLAPGKVLSNKVIVEVARVLPRTPAELAQVKGFPGRSQGATKRWFRIITRALKSPRRNWPKPQQRKEGIPDRRAWASYYPEEHEVLQGIRALIDDLAADINVPGENILQPSTLRVAVWMAKHTGEIHNAETLNAVLRDYGARQWQIDQTFPILSANLLKL GT:EXON 1|1-403:0| BL:SWS:NREP 1 BL:SWS:REP 13->308|RND_HAEIN|4e-14|28.7|286/399| BL:PDB:NREP 1 BL:PDB:REP 5->389|3cymA|2e-59|36.3|375/415| RP:PDB:NREP 1 RP:PDB:REP 5->396|3cymA|3e-27|32.4|386/415| RP:PFM:NREP 2 RP:PFM:REP 37->172|PF01612|4e-07|35.6|135/171|3_5_exonuc| RP:PFM:REP 226->275|PF00570|2e-04|36.0|50/68|HRDC| HM:PFM:NREP 2 HM:PFM:REP 28->180|PF01612|8.6e-30|32.0|150/174|3_5_exonuc| HM:PFM:REP 225->277|PF00570|4.2e-15|34.0|53/68|HRDC| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF01612|IPR002562| GO:PFM GO:0005622|"GO:intracellular"|PF01612|IPR002562| GO:PFM GO:0006139|"GO:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"|PF01612|IPR002562| GO:PFM GO:0008408|"GO:3'-5' exonuclease activity"|PF01612|IPR002562| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00570|IPR002121| GO:PFM GO:0005622|"GO:intracellular"|PF00570|IPR002121| RP:SCP:NREP 2 RP:SCP:REP 25->197|1wwmA1|2e-26|22.8|167/180|a.132.1.3| RP:SCP:REP 208->299|2hbjA1|9e-15|22.5|89/96|a.60.8.4| HM:SCP:REP 15->221|2hbjA2|5.7e-48|37.4|203/0|c.55.3.5|1/1|Ribonuclease H-like| HM:SCP:REP 201->313|2cprA1|1.1e-20|29.5|112/0|a.60.8.4|1/1|HRDC-like| OP:NHOMO 395 OP:NHOMOORG 385 OP:PATTERN -------------------------------------------------------------------- ---1111111111-11111-11111111111111111111111111111111111111111111111111111111111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111111111111111111111111111111111-11111111111-1111111111111111111111111111111111111111111--1----------------------1111-11111------------------------------------------------------------------------1111----------11111111111111--1---------------------------1111111-11111111-1111111111111--1---1-------1--11------------------------------1111--11-1111111111111111----------111111111111-------------11-111111-111111-1-1-----------111111111-1111111111111-111-----111111111111111111111111--------------------------------------------------------111 ------1---------1----------11-111---------------11----1111--------11------------------1-----1-------1-------1------1---1-111--121242-213-1----1--111--1-1--111---1-1-1-11--1-11-------------2-1-1--1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 391 STR:RPRED 97.0 SQ:SECSTR ####ccccTTccccEEccHHHHHHHHHHHHccEEEEEEEEEEcTTTcccccEEEEEEEEETTEEEEEcHHHHHHTTccHHHHHHHHTTcEEccHHHHHHHHHHHTccccEEEEHHHHHHHTTcccccHHHHHHHHHcEEcccccTTccTTcccccHHHHHHHHHHHHTHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHcccccccccGGGccTTGGGTTcHHHHHHHHHHHHHHHHHHHHTTccHHHHccHHHHHHHHHHccccHHHHHTccGGGcccccccccTHHHHHHHHHHHHTccGGGccccccccHHHEHHHHcHHHHHHHHHHHHHHHHHHHHHTccHHHHccHHHHHHHHccTT#cccGGGGccHHHHHHHHTccHHHHHHHHHHH####### DISOP:02AL 1-2,301-320| PSIPRED ccccccccccccccEEccHHHHHHHHHHHHcccccEEEEcccccccccccEEEEEEEEEcccEEEEEEcccccHHHHHHHHHHHccccEEEEccHHHHHHHHHccccccccHHHHHHHHHcccccccHHHHHHHHHcccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEcHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcc //