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Corynebacterium glutamicum R (cglu2)
Gene : BAF54808.1
DDBJ      :             hypothetical protein
Swiss-Prot:IF2_CORGB    RecName: Full=Translation initiation factor IF-2;

Homologs  Archaea  68/68 : Bacteria  912/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.43.3c.20.1c.37.1
:1003 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   499->1001 1zo1I PDBj e-129 49.9 %
:RPS:PDB   498->995 1darA PDBj 1e-46 12.0 %
:RPS:SCOP  418->463 1nd9A  a.6.1.6 * 2e-09 26.1 %
:RPS:SCOP  499->669 1g7rA4  c.37.1.8 * 2e-43 37.4 %
:RPS:SCOP  644->761 1n0uA1  b.43.3.1 * 2e-11 14.8 %
:RPS:SCOP  788->899 1g7rA3  c.20.1.1 * 2e-24 26.4 %
:RPS:SCOP  904->1001 1d1nA  b.43.3.1 * 2e-21 53.6 %
:HMM:SCOP  495->694 1f60A3 c.37.1.8 * 3.7e-50 35.2 %
:HMM:SCOP  675->759 1g7sA1 b.43.3.1 * 2.8e-26 55.3 %
:HMM:SCOP  780->910 1g7sA3 c.20.1.1 * 3.7e-36 44.8 %
:HMM:SCOP  904->1002 1d1nA_ b.43.3.1 * 3.6e-27 48.0 %
:RPS:PFM   4->52 PF04760 * IF2_N 1e-05 41.7 %
:RPS:PFM   419->464 PF04760 * IF2_N 3e-05 37.0 %
:RPS:PFM   503->661 PF00009 * GTP_EFTU 8e-15 35.8 %
:RPS:PFM   798->894 PF11987 * IF-2 2e-19 50.0 %
:HMM:PFM   501->662 PF00009 * GTP_EFTU 6.5e-41 38.8 160/189  
:HMM:PFM   789->893 PF11987 * IF-2 1.1e-34 49.0 104/109  
:HMM:PFM   2->53 PF04760 * IF2_N 1.5e-16 40.4 52/54  
:HMM:PFM   419->465 PF04760 * IF2_N 2.1e-10 29.8 47/54  
:HMM:PFM   693->755 PF03144 * GTP_EFTU_D2 2.2e-10 38.1 63/74  
:HMM:PFM   924->985 PF03144 * GTP_EFTU_D2 1.5e-07 25.9 58/74  
:BLT:SWISS 1->61,303->1003 IF2_CORGB 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54808.1 GT:GENE BAF54808.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2012742..2015753) GB:FROM 2012742 GB:TO 2015753 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54808.1 LENGTH 1003 SQ:AASEQ MPGKLRVHELAKQLGITSKELLATLKDKGEFVKTASSTIEPPVVKRMQEHYGSSGSDKSDTAAKPAAAKPAAPKPAASAAPKPGAPAKPAAPAAKPAPAAASAAKPGAAPKPGVQAKPAAAAKPGAPAKPAAPSAAKPGSAPKPAAAAKPAFSGPTPGDAAKKAEPAAKPGAEAPRPDGMPRPMGKPAPKPGARAPRVANNPFSTGGGERPAPRPGGGPRPGGGPRPGGGPRPQGQGRPGGQRDGQRDGQRDGQGNRGGQRQGAGAGGPRPQGGPRPQGGSRPQGGSAQGGSAKGAQGAPSQERQGGGRRPSPAMMPPTPGQMPAKAPGKGGRGGQAGGGAGGGFNRGGGTGGGAGRGGRRGGTAGAFGRPGGAPRRGRKSKRQKRNEYESMQAPNVIGGVRLPDGKGATIRLARGASLADFADKIGADAAALVQALFNLGEMVTATASVSDETLQLLGEEMNYKVQVVSPEDEDRELLESFDLQFGEDEGGEADLAKRPPVVTVMGHVDHGKTRLLDTIRKANVGSDEAGGITQGIGAYQVKVNVEDTERTITFLDTPGHEAFTAMRARGAKSTDIAVLVVAADDGVMPQTVEAINHAKAADVPIVVAVNKIDKPEASPEKIRGQLTEYGLIPEEYGGDTIFVDISAKQGLNIDELLASVCLTADAELDLVANPEMDAQGVAIEAHLDRGRGPVATVIVQRGTLRVGDSIVAGDTYGRVRRMVDEYGRDVEEAGPSRPVQVQGLNGVPGAGDNLLVVEDDRIARQIANQRNARKRNALAARSRKRVSLEDLDSVLKEHSTLNLILKGDNAGSVEALEEALLKIEMDDEVQLNIIDRGVGAVTQTNVTLAAASDAVIIAFNVRAEGKATEEANAEGVDVRYYTIIYRAIEEVEAALKGMLKPIYEERVIGHAEIRAIFKASSVGLIAGCMVEDGKVRRNATVRITRDGNVIAENAKIVSLRREKDDATEVSAGYECGMVLSYPDISVDDKIEVYEMVEVPREA GT:EXON 1|1-1003:0| SW:ID IF2_CORGB SW:DE RecName: Full=Translation initiation factor IF-2; SW:GN Name=infB; OrderedLocusNames=cgR_1814; SW:KW Complete proteome; Cytoplasm; GTP-binding; Initiation factor;Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->61,303->1003|IF2_CORGB|0.0|100.0|762/1003| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding| GO:SWS GO:0003743|"GO:translation initiation factor activity"|Initiation factor| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 62->151|aakpaaakpaapkpaasaapkpgapakpaapaakpapaaasaakpgaapkpgvqakpaaaakpgapakpaapsaakpgsapkpaaaakpa| SEG 160->175|aakkaepaakpgaeap| SEG 179->197|gmprpmgkpapkpgarapr| SEG 206->302|gggerpaprpgggprpgggprpgggprpqgqgrpggqrdgqrdgqrdgqgnrggqrqgagaggprpqggprpqggsrpqggsaqggsakgaqgapsq| SEG 324->379|pakapgkggrggqagggagggfnrgggtgggagrggrrggtagafgrpggaprrgr| SEG 762->786|riarqianqrnarkrnalaarsrkr| BL:PDB:NREP 1 BL:PDB:REP 499->1001|1zo1I|e-129|49.9|495/501| RP:PDB:NREP 1 RP:PDB:REP 498->995|1darA|1e-46|12.0|490/615| RP:PFM:NREP 4 RP:PFM:REP 4->52|PF04760|1e-05|41.7|48/52|IF2_N| RP:PFM:REP 419->464|PF04760|3e-05|37.0|46/52|IF2_N| RP:PFM:REP 503->661|PF00009|8e-15|35.8|159/183|GTP_EFTU| RP:PFM:REP 798->894|PF11987|2e-19|50.0|96/111|IF-2| HM:PFM:NREP 6 HM:PFM:REP 501->662|PF00009|6.5e-41|38.8|160/189|GTP_EFTU| HM:PFM:REP 789->893|PF11987|1.1e-34|49.0|104/109|IF-2| HM:PFM:REP 2->53|PF04760|1.5e-16|40.4|52/54|IF2_N| HM:PFM:REP 419->465|PF04760|2.1e-10|29.8|47/54|IF2_N| HM:PFM:REP 693->755|PF03144|2.2e-10|38.1|63/74|GTP_EFTU_D2| HM:PFM:REP 924->985|PF03144|1.5e-07|25.9|58/74|GTP_EFTU_D2| GO:PFM:NREP 6 GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF04760|IPR006847| GO:PFM GO:0006413|"GO:translational initiation"|PF04760|IPR006847| GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF04760|IPR006847| GO:PFM GO:0006413|"GO:translational initiation"|PF04760|IPR006847| GO:PFM GO:0003924|"GO:GTPase activity"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00009|IPR000795| RP:SCP:NREP 5 RP:SCP:REP 418->463|1nd9A|2e-09|26.1|46/49|a.6.1.6| RP:SCP:REP 499->669|1g7rA4|2e-43|37.4|163/212|c.37.1.8| RP:SCP:REP 644->761|1n0uA1|2e-11|14.8|115/138|b.43.3.1| RP:SCP:REP 788->899|1g7rA3|2e-24|26.4|106/131|c.20.1.1| RP:SCP:REP 904->1001|1d1nA|2e-21|53.6|97/99|b.43.3.1| HM:SCP:REP 495->694|1f60A3|3.7e-50|35.2|196/239|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 675->759|1g7sA1|2.8e-26|55.3|85/101|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 780->910|1g7sA3|3.7e-36|44.8|125/131|c.20.1.1|1/1|Initiation factor IF2/eIF5b, domain 3| HM:SCP:REP 904->1002|1d1nA_|3.6e-27|48.0|98/99|b.43.3.1|1/1|Translation proteins|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l77556B78D3D955A4555 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 623 STR:RPRED 62.1 SQ:SECSTR ###########################################################################################################################################################################################################################################################################################################################################################################################HHHHHHHHHHHHHTTEEEEEEEccTTcHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccTHHHHHHHHHccEEcccTTccccEEcccccccccHHHHHHHHHHGGEEEEEEEEcTTccHHHHHHHHHHHHccccEEEEEETTEEEEEEcccTTccEEEEEEcTTcTTccHHHHHHHHHHTTcccEEEcEEEEccGGEEETTTTEEEEEccTTcccEEEEcccGGGHHHHHHHHHHHHHHHTTTTccEEEEEccGGGTccHHHHHHHHHcccccEEEEcccTTcccEEEEEEEEEETTTEEEEEEEEEEcEEEcccEEEETTTccEEEEEccccEEEEcEEETTcEEEEEccccccTccTcEEEETTcccccccccccccEEEccEEEEEcccccccEEEcTTTcccccEEEccccEEEEEEEEEccccccEEEEEEEEEEEccTTccEHHHHHHHHHTTccTTTccccccEEEEEEEEcccTTTccHHHHHHHHHHHHHHHHHTcccEEEEEEEEEEEEEcTTTTTHHHHHHHHTTccEEEEEEETTEEEEEETEEEEEcEETTTcccHHHHHHHHTTTcEEEEEEEEEEccHHHHHHHHcTEEEEEE# DISOP:02AL 1-2,30-410,789-789,1001-1004| PSIPRED ccccccHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccEEEcccccHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHHccEEEEEcccccHHHHHHHcccccccccccHHHccccccEEEEEccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHcccccHHccccEEEEEEcccccccHHHHHHHHHHHccHHHcccccccccccEEEEEEEEEccccEEEEEEEEEcEEccccEEEEEcccccEEEEEcccccEEcccccccEEEEEccccccccccEEEEccccccHHHHccccccccccHHHHHHccccHHHHHHHHHHHccEEEEEEEEcccccHHHHHHHHHHcccccEEEEEEEEccccccccHHHHHHcccccEEEEEEccccHHHHHHHHHcccEEEEEHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEEEcccccEEEEEEEEEcEEEcccEEEEEEccEEEEEEEEEEHHHHccccHHHHHcccEEEEEEcccccccccEEEEEEEEEEEccc //