[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF54831.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  636/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.17.4d.175.1e.3.1
:622 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   105->575 1mwxB PDBj 1e-18 23.4 %
:RPS:PDB   123->243 3bq8B PDBj 6e-07 10.6 %
:RPS:PDB   264->599 2bg1A PDBj 7e-36 14.8 %
:RPS:SCOP  37->134 1mwrA1  d.17.4.5 * 7e-15 13.0 %
:RPS:SCOP  140->293 1rp5A3  d.175.1.1 * 4e-14 15.6 %
:RPS:SCOP  308->575 1mwrA3  e.3.1.1 * 1e-48 25.5 %
:HMM:SCOP  34->138 1vqqA1 d.17.4.5 * 1e-07 20.2 %
:HMM:SCOP  139->307 1vqqA2 d.175.1.1 * 1.7e-07 20.0 %
:HMM:SCOP  308->614 1vqqA3 e.3.1.1 * 2.6e-60 31.9 %
:RPS:PFM   31->137 PF05223 * MecA_N 7e-09 28.0 %
:RPS:PFM   328->593 PF00905 * Transpeptidase 2e-23 36.2 %
:HMM:PFM   329->596 PF00905 * Transpeptidase 1e-51 30.3 267/304  
:HMM:PFM   32->140 PF05223 * MecA_N 3.1e-30 32.1 109/118  
:BLT:SWISS 264->592 PBP2_HAEIN 8e-20 30.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54831.1 GT:GENE BAF54831.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2040304..2042172) GB:FROM 2040304 GB:TO 2042172 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54831.1 LENGTH 622 SQ:AASEQ MNKVQRRSLMALCMTVAFAGGSLTACTPRPDTADPIAEEFLQAWASQDFDTIADITDQADLATEMLSTSFDGLQADSVELTLDSVDSRDTIATANFSVVWKLPRDREVSYDSSMTLTKMRNEWTVRWEPSLVHPKLGANQHLELRAIEAQRANVISSDGAPVLAPGSIYRVLADPSAGDADVVVKRVADYLNEAHATDENVNTLDVEDIMSNLGDSTYSLTTVDANLGARMEQDLAGIPGLTFNEEASMVATDPGFAPDIVSRVARIVEDELEGSNGWRASIVTSNGAVIDDIAYDAPELAPSVRISLDHNVQRAAEEAVDLRAEMKAMMVVMRPSTGEILAVAQTDEADKDGDVALMGQYPPGSTFKIITAAAGLAHEGLTPDSIVPCPGTMNIYGRIVTNYNSFSLGNTSLDDAFANSCNTTFADISTNLEPGQLKNVAKQFGLGIDYQIPGLDTMTGSVPAGDIVLDRTESGYGQGLDLASPFGMALVASTAATGSVPTPTLISGHETVASEEVPALDPEVLANVQRMMKSVVNDGTARGMRQTGGQIYAKTGEAEINEGSHAWFTGYREDDIAFATLVVLGGGSEAAAAVTDQFFVKLDELRAGGEVAVSEAEEQPVG GT:EXON 1|1-622:0| BL:SWS:NREP 1 BL:SWS:REP 264->592|PBP2_HAEIN|8e-20|30.7|326/651| SEG 607->618|aggevavseaee| BL:PDB:NREP 1 BL:PDB:REP 105->575|1mwxB|1e-18|23.4|453/625| RP:PDB:NREP 2 RP:PDB:REP 123->243|3bq8B|6e-07|10.6|113/128| RP:PDB:REP 264->599|2bg1A|7e-36|14.8|317/455| RP:PFM:NREP 2 RP:PFM:REP 31->137|PF05223|7e-09|28.0|107/118|MecA_N| RP:PFM:REP 328->593|PF00905|2e-23|36.2|257/289|Transpeptidase| HM:PFM:NREP 2 HM:PFM:REP 329->596|PF00905|1e-51|30.3|267/304|Transpeptidase| HM:PFM:REP 32->140|PF05223|3.1e-30|32.1|109/118|MecA_N| GO:PFM:NREP 3 GO:PFM GO:0046677|"GO:response to antibiotic"|PF05223|IPR007887| GO:PFM GO:0008658|"GO:penicillin binding"|PF00905|IPR001460| GO:PFM GO:0009273|"GO:peptidoglycan-based cell wall biogenesis"|PF00905|IPR001460| RP:SCP:NREP 3 RP:SCP:REP 37->134|1mwrA1|7e-15|13.0|92/106|d.17.4.5| RP:SCP:REP 140->293|1rp5A3|4e-14|15.6|154/200|d.175.1.1| RP:SCP:REP 308->575|1mwrA3|1e-48|25.5|259/330|e.3.1.1| HM:SCP:REP 34->138|1vqqA1|1e-07|20.2|104/0|d.17.4.5|1/1|NTF2-like| HM:SCP:REP 139->307|1vqqA2|1.7e-07|20.0|160/0|d.175.1.1|1/1|Penicillin binding protein dimerisation domain| HM:SCP:REP 308->614|1vqqA3|2.6e-60|31.9|301/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 1133 OP:NHOMOORG 638 OP:PATTERN -------------------------------------------------------------------- 2332623333343333333-34223533333344445666233433411112333222111232332786411111112312311111-----------111-11---11---------------2221221112121132---142112112221111222221131132122111122111111--22123344444554354455423222245412312-122222231-1111111111111111111-11122111-111112211---------------------------------------------------2235433333333333133255523411322233343321223444211223-2111-1-11-111-------12------------11-1111---2-111--1111111-11111222122212111111112111112211----------112211111111111111121211111-2333322222222122222122211112112221111111212112222221--------212112-3212121111111123233332233225-1111111111111-1111--1-1111122--1-1-221-1111111-111112122112----112------2-11111------------------------------212----1----------------2---------111111111111----2222211112211-111111111111111------1222111111222211111-221---------1-11------2121111111111111111112111111111111-1111--------------------------11-1122111221 ------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 498 STR:RPRED 80.1 SQ:SECSTR ########################################################################################################EEEEEEc####EEEETTEHHHHHHHHHHHHHHcEEETTEEEcccccEEEEEcTTccEEEEccccHHHTccGGGGGGccEEEEEEEEHHHHHHTTcccTHHHHHHHHHHcTTcEEEEEEEEEEEEcTTEcccHccccEEEcccccEEEEccHcHHHHHHHHHHHHHHHHHHTTccTTTTccHHHHHHHHHHHHHHHHTcccEEcccHHHHHHHHHHHHcccccEEEEEEEETTTccEEEEEccccTTTcccTTTTcccccGGGGHHHHTHHHHHHTTccTTcEEEccccccTTccccccTTcccccEEEHHHHHHHTccHHHHHHHHHHHHTTccHHHHHHHTTccccccccTTHHHHTTcTTcHHcccccGGGTTTccccHHHHHHHHHHHHTTTEEcccccEEEEEcccccEEcccHHHHHHHHHHHHHHHHTcccccHHHHHHccEEEEEccTTccEEEEEEEEEcccEEEEEEEEcTTTTTTHHHHHHHHHHHHHHccc################ DISOP:02AL 1-4,25-35,614-614,616-623| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHHccccccEEEEEccccccccEEEEEEEEEEEcccccEEEEEEEEEEEEEccEEEEEEcHHHccHHHccccEEEEEEEcccccEEEEEcccEEEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccEEEEccccHHHHHHHHHHHHccccEEEEcHHHHHccccccHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccEEEEcccHHHHHHHHHHHHHccccEEEEEEEEcccccEEEEEEccccccccccEEEccccccHHHHHHHHHHHHHcccccHHHEEEcccEEEEccEEEEEcccccccEEcHHHHHHHccHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHcccEEEccEEEEEEEcccccEEEEccHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEccccccEEEEEEcccccEEEEEEEEccccHHHHHHHHHHHHHHHccccccccccccccccccc //