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Corynebacterium glutamicum R (cglu2)
Gene : BAF54919.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  182/915 : Eukaryota  1/199 : Viruses  8/175   --->[See Alignment]
d.163.1
:393 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   203->358 1a0pA PDBj 1e-04 33.9 %
:RPS:PDB   77->368 2crxB PDBj 2e-22 14.0 %
:RPS:SCOP  177->362 1aihA  d.163.1.1 * 7e-19 25.0 %
:HMM:SCOP  175->371 1a0pA2 d.163.1.1 * 4.3e-32 28.6 %
:RPS:PFM   212->358 PF00589 * Phage_integrase 6e-16 35.1 %
:HMM:PFM   176->359 PF00589 * Phage_integrase 1.2e-30 28.9 166/173  
:HMM:PFM   37->45 PF12373 * Msg2_C 0.00094 77.8 9/30  
:BLT:SWISS 178->362 XERCL_THETN 3e-16 34.3 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54919.1 GT:GENE BAF54919.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 2112377..2113558 GB:FROM 2112377 GB:TO 2113558 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54919.1 LENGTH 393 SQ:AASEQ MAVQRRPKAGKLKNGKVQWVVRYRDPSGKEHSKTFYTEKEAKAFDTEQSRALRRNEWINPVDAETTLGVITQAWADEATRDETISVRKTFLRNLGPLADMPISAVKTSDILSWRKKLLTGRDWLDGSTLSESTTANTVGQLMSVLKRAQQDRMILVIPTVRVPKSAPARAISRQELLTEEQIQSIAHAVATPKGHYKARPWLKSMIRVAAGSGLRVSEICALRPEDVNFLRHTISVSRQMGRGGVAKTPKSKASVRTIPVARWVTTEIVEWIKENPVGESGWIWTRPVGEPGRPFDRSAVTHGLLPAIKAHGLRQHSFHDFRHFFASVLIFKGVPANAVQDALGHASASVTWDTYAHIFPGQDDVMRDALAGLNLLRDDCGIGKKKAPGSHAG GT:EXON 1|1-393:0| BL:SWS:NREP 1 BL:SWS:REP 178->362|XERCL_THETN|3e-16|34.3|169/391| BL:PDB:NREP 1 BL:PDB:REP 203->358|1a0pA|1e-04|33.9|124/271| RP:PDB:NREP 1 RP:PDB:REP 77->368|2crxB|2e-22|14.0|279/309| RP:PFM:NREP 1 RP:PFM:REP 212->358|PF00589|6e-16|35.1|134/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 176->359|PF00589|1.2e-30|28.9|166/173|Phage_integrase| HM:PFM:REP 37->45|PF12373|0.00094|77.8|9/30|Msg2_C| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 177->362|1aihA|7e-19|25.0|148/170|d.163.1.1| HM:SCP:REP 175->371|1a0pA2|4.3e-32|28.6|175/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 287 OP:NHOMOORG 195 OP:PATTERN --1-------------1--------------------------------------1--1--------- 12------111-2--3-----1--1-1111112313-2-1-2231-------2---1----17-21-221--111211-1232------111--------------1-----------------------------------12-1-1-----------------------------------1------------1-13-1121-111-----1-22--111--5--122--2111-1-111111-1-----41-113-2---12--32-31-1-1341112-1-11------2--21-1-222-341---1--1---2222111--11--1---123122----1-2---231-1121-31-11-113---------------1----1-------------------1-11--------2---------------------------------------1-------------------------------------1-------------------1-1--1-------------------------------1---------1-----1------1------------------1--------------1--------2--1-------------------1--------------------------1------------------------------------1---------------------------------------------------------------------------21----------2----1-----------1-----------1------------11------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- -------------------------------------------------------------------------------------1------1------------1-11----1-----------1---------------1--------------------------------- STR:NPRED 316 STR:RPRED 80.4 SQ:SECSTR ###############################################################ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHTTcccccccHHHHHHHHHHHHcTTHHHHHTTccHHHHHHHHHHHHHHHHTTccccGGGcHHHHHHHHHHHHHHccccccccHHHHHHHHHHHTTcccHHHcHHHHHHHHHHHHHHcccHHHHHHccGGGEEEcTTccEEEEEcccEEEEccHHHHHHHHHHHHHHTcTTcTTcccccEEcTTccEEccccccHHHHHHHHHHHHHHHHccccTTccccccTTHHHHHHHHHHHHTTccHHHHHHHHTcccHHHHHHHTcccHHTcHHHTTcGGGTcHTTccc############## DISOP:02AL 1-11,167-169,378-394| PSIPRED ccccccccccccccccEEEEEEEEcccccEEEEccccHHHHHHHHHHHHHHHHcccccccHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHcccHHHccccccEEEEEEEEccccccccccccccEEEEEccHHHHHHHHHHHHHccccccccEEEcccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccc //