[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF54937.1
DDBJ      :             hypothetical protein
Swiss-Prot:RS16_CORGL   RecName: Full=30S ribosomal protein S16;

Homologs  Archaea  0/68 : Bacteria  787/915 : Eukaryota  84/199 : Viruses  0/175   --->[See Alignment]
d.27.1
:165 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->89 1hnwP PDBj 2e-21 53.5 %
:RPS:PDB   3->83 3bbnP PDBj 2e-25 34.2 %
:RPS:SCOP  3->82 1fjgP  d.27.1.1 * 2e-26 53.8 %
:HMM:SCOP  2->83 1fjgP_ d.27.1.1 * 1.4e-26 52.4 %
:RPS:PFM   9->67 PF00886 * Ribosomal_S16 2e-12 49.2 %
:HMM:PFM   9->67 PF00886 * Ribosomal_S16 4.7e-24 45.8 59/62  
:BLT:SWISS 1->124 RS16_CORGL 1e-67 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54937.1 GT:GENE BAF54937.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2128623..2129120) GB:FROM 2128623 GB:TO 2129120 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54937.1 LENGTH 165 SQ:AASEQ MAVKIKLQRLGKIRTPHYRVVIADARTKRDGKVIENIGIYEPKAEPSVIKINSERAQHWLSVGAQPTEAVAALLKVTGDWQKFKGIEGAEGTLRVAEPKPSKLELFNQALSEANNGPTAEAITEKKKKAREDKEAKEAAEKAAAEKAAAAESEEAPAEEAAAEEA GT:EXON 1|1-165:0| SW:ID RS16_CORGL SW:DE RecName: Full=30S ribosomal protein S16; SW:GN Name=rpsP; OrderedLocusNames=Cgl2054, cg2253; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->124|RS16_CORGL|1e-67|100.0|124/165| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| SEG 125->164|kkkkaredkeakeaaekaaaekaaaaeseeapaeeaaaee| BL:PDB:NREP 1 BL:PDB:REP 3->89|1hnwP|2e-21|53.5|86/88| RP:PDB:NREP 1 RP:PDB:REP 3->83|3bbnP|2e-25|34.2|79/80| RP:PFM:NREP 1 RP:PFM:REP 9->67|PF00886|2e-12|49.2|59/62|Ribosomal_S16| HM:PFM:NREP 1 HM:PFM:REP 9->67|PF00886|4.7e-24|45.8|59/62|Ribosomal_S16| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00886|IPR000307| GO:PFM GO:0005622|"GO:intracellular"|PF00886|IPR000307| GO:PFM GO:0005840|"GO:ribosome"|PF00886|IPR000307| GO:PFM GO:0006412|"GO:translation"|PF00886|IPR000307| RP:SCP:NREP 1 RP:SCP:REP 3->82|1fjgP|2e-26|53.8|80/83|d.27.1.1| HM:SCP:REP 2->83|1fjgP_|1.4e-26|52.4|82/83|d.27.1.1|1/1|Ribosomal protein S16| OP:NHOMO 911 OP:NHOMOORG 871 OP:PATTERN -------------------------------------------------------------------- 11-1111111111111111-111111111111111111111111111111111111111111111111111111111111111--1111111111111111111-11111111111111111111111111111-11111111111-------11-----11----1-----11----1--1-1111111-111111111111111111111111111111111111111111-1111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111-11111111111111111111-1-1111111111111-1111111111111111111111111111111111111111111111111111111111--111111111111111111111111111111----1------1111111--111111------1-------111111111----11111111111111111111111111111111-11111111111111112111111111111111111111111111111111111111111111111111111111---11-1111111--111-11111111111-1111111111111111111---11111----------------111111111-111111111111111-1111111111--11---111-1111-11-1111111111111111111-11111111111111111111---11111-----11111111111111--1-1111111111111111111111-1-1--11111-111111111111111111111 ------------111-1111111111-1111111111111111111-11111111--111111----1--1--1--1-111-----------1----------112-1-11--------------------------------------------------------------133--2M1112242221231111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 101 STR:RPRED 61.2 SQ:SECSTR #cEEEcccccccTTccccccccEETTcccccccccccccccTTccccEccccTTTccccTTcccEEcTTTccccTTTTcccccccTTEEEEEETTEEEEEEc############################################################### DISOP:02AL 83-100,112-166| PSIPRED cccHHEHHHcccccccEEEEEEEEcccccccccEEEcccccccccccEEEEcHHHHHHHHHccccccHHHHHHHHHccHHHHHHcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcc //