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Corynebacterium glutamicum R (cglu2)
Gene : BAF54946.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  898/915 : Eukaryota  135/199 : Viruses  0/175   --->[See Alignment]
a.24.13b.65.1c.37.1
:586 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   330->585 2q9aB PDBj 5e-37 40.6 %
:RPS:PDB   316->585 2cnwE PDBj 5e-26 33.0 %
:RPS:SCOP  294->373 1ftsA1  a.24.13.1 * 4e-12 17.5 %
:RPS:SCOP  432->544 1f3uA  b.65.1.1 * 6e-20 14.5 %
:HMM:SCOP  284->364 1vmaA1 a.24.13.1 * 1.5e-18 28.4 %
:HMM:SCOP  379->588 1ls1A2 c.37.1.10 * 2.3e-49 39.3 %
:RPS:PFM   309->366 PF02881 * SRP54_N 7e-04 28.1 %
:RPS:PFM   407->585 PF00448 * SRP54 1e-28 41.7 %
:HMM:PFM   387->586 PF00448 * SRP54 7.8e-73 52.0 196/196  
:HMM:PFM   290->366 PF02881 * SRP54_N 8.3e-13 24.3 74/75  
:BLT:SWISS 297->585 FTSY_MYCLE 2e-81 61.6 %
:PROS 559->572|PS00300|SRP54
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF54946.1 GT:GENE BAF54946.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2139871..2141631) GB:FROM 2139871 GB:TO 2141631 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF54946.1 LENGTH 586 SQ:AASEQ MDATFWIIGLVLLVILAIIIVLIVGNQRGKSKTVSFEKPEEEKKQLTQQEKSGNYQAQGGFNFAPAKNEEPVLRDDQKLSTQPPATPVVPPVVPPVVPPAADPVTEPPVDTAEPGAAAEKPATDEFAAQAEPIAPVKPEKAPEEPSGGEHAVDAASAEPVPEPTSEVPEAISLDVAETLNAAPEETPAELEEEPEAEVVPAAEEAPVFEETVEELDEPVGVAGIEAAENAEVQALESVEEEATEAAEAASVTAEFAEAAREQTPVPDTAPEPAPAPIDDIAPASGRIGKLRTRLSRSQNVFGKSVLGILSAGDLDEDAWEDIEAMLIKADLGSKVTARVVDKLRDKIAERGVGSEAEARAMLRETLIDACRPDLDRSIKAMPNEGKPAVVLVVGVNGTGKTTTTGKLARVLVSMGHKVVLGAADTFRAAAADQLETWGRRVGAETVRGAEGADPASIAFDAVAKGVERQADVVLIDTAGRLHTSTGLMDQLGKVKRVVEKKAVVDEVLLVLDSTVGQNGMQQARIFREVVEITGVVLTKLDGTAKGGIVFQVQEELGVPVKLVGLGEGADDLAPFEVEGFVDALLG GT:EXON 1|1-586:0| BL:SWS:NREP 1 BL:SWS:REP 297->585|FTSY_MYCLE|2e-81|61.6|289/430| PROS 559->572|PS00300|SRP54|PDOC00272| TM:NTM 1 TM:REGION 4->25| SEG 7->25|iiglvllvilaiiivlivg| SEG 37->51|ekpeeekkqltqqek| SEG 83->110|ppatpvvppvvppvvppaadpvteppvd| SEG 130->145|aepiapvkpekapeep| SEG 154->170|aasaepvpeptsevpea| SEG 176->215|aetlnaapeetpaeleeepeaevvpaaeeapvfeetveel| SEG 236->259|esveeeateaaeaasvtaefaeaa| SEG 263->283|tpvpdtapepapapiddiapa| SEG 385->406|gkpavvlvvgvngtgkttttgk| SEG 422->431|aadtfraaaa| SEG 493->512|kvkrvvekkavvdevllvld| BL:PDB:NREP 1 BL:PDB:REP 330->585|2q9aB|5e-37|40.6|244/290| RP:PDB:NREP 1 RP:PDB:REP 316->585|2cnwE|5e-26|33.0|270/279| RP:PFM:NREP 2 RP:PFM:REP 309->366|PF02881|7e-04|28.1|57/74|SRP54_N| RP:PFM:REP 407->585|PF00448|1e-28|41.7|175/196|SRP54| HM:PFM:NREP 2 HM:PFM:REP 387->586|PF00448|7.8e-73|52.0|196/196|SRP54| HM:PFM:REP 290->366|PF02881|8.3e-13|24.3|74/75|SRP54_N| GO:PFM:NREP 5 GO:PFM GO:0005515|"GO:protein binding"|PF02881|IPR013822| GO:PFM GO:0005525|"GO:GTP binding"|PF02881|IPR013822| GO:PFM GO:0006614|"GO:SRP-dependent cotranslational protein targeting to membrane"|PF02881|IPR013822| GO:PFM GO:0005525|"GO:GTP binding"|PF00448|IPR000897| GO:PFM GO:0006614|"GO:SRP-dependent cotranslational protein targeting to membrane"|PF00448|IPR000897| RP:SCP:NREP 2 RP:SCP:REP 294->373|1ftsA1|4e-12|17.5|80/84|a.24.13.1| RP:SCP:REP 432->544|1f3uA|6e-20|14.5|110/118|b.65.1.1| HM:SCP:REP 284->364|1vmaA1|1.5e-18|28.4|81/0|a.24.13.1|1/1|Domain of the SRP/SRP receptor G-proteins| HM:SCP:REP 379->588|1ls1A2|2.3e-49|39.3|206/0|c.37.1.10|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2159 OP:NHOMOORG 1100 OP:PATTERN 11212222111222222222222222222222222222222222222222222222222222221-12 2222222222222222222-22112222222222222222222222122222222222222222222222122222222222222222222222222--222222222222222222222222222222222222222222---2222222222222222222222222222222222222222222222-22222222222222222222222222222222222222222222222222222222122222221222222222222222222222122222222222222222222222222222222222222222222222222222222222222222222222222222222221222222222222222111122222222222222222222222222222-22222222222222222222222221222222222222222222222222222222222222222222222222222222222212222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222232222222222222222222222222222222222222222222222222222222222-2222221222222222222222222222-2222222222222222222222222222222222222222222222222122222222222222212222222222222222222222222222222222212222222222222222222222222222222222222222222222212222222222222222222------2222212122221222-22222212222222112222222222222222 112211--5221111---1-------------------------------111111------1-11-1111-1-11111111111111-111-1111111111-11111431311121111-1-22-1-141-12111111-11111--11--21122-12--11-1112411213323r332333246-433321213 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 298 STR:RPRED 50.9 SQ:SECSTR ################################################################################################################################################################################################################################################################################################HHHHHHHHHHHTTTTcTTccccHccccHHHHHHHHHHHHHTTccHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHTccccccccccccccEEEEEccTTccHHHHHHHHHHHHHTTTccEEEEccccccTTTTHHHHHHHHHHTccEEcccTTccHHHHHHHHHHHHHHHTccEEEEccccccTTcHHHHHHHHHHHHHHHHHcTTcccEEEEETTccTHHHHHHHHHHHHHcccEEEEEcTTcccccTTHHHHHHHHcccEEEEEccccTTcEEEccHHHHHHHHTT DISOP:02AL 1-1,24-273| PSIPRED ccHHHHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHcccccccEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHcccccccEEEEEEEccccHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHcc //