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Corynebacterium glutamicum R (cglu2)
Gene : BAF55010.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  909/915 : Eukaryota  3/199 : Viruses  3/175   --->[See Alignment]
a.4.6b.29.1b.40.4b.42.4c.6.3d.58.1
:1194 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->1060 2hpiA PDBj 0.0 42.5 %
:RPS:PDB   12->1178 3e0dA PDBj 0.0 39.8 %
:RPS:SCOP  16->57 2anuA1  c.6.3.1 * 7e-05 32.5 %
:RPS:SCOP  43->186 1q16B  d.58.1.5 * 6e-17 11.2 %
:RPS:SCOP  315->464 1r8nA  b.42.4.1 * 2e-27 12.7 %
:RPS:SCOP  439->539 1fc3A  a.4.6.3 * 2e-08 11.0 %
:RPS:SCOP  721->897 1kitA2  b.29.1.8 * 3e-42 8.2 %
:RPS:SCOP  990->1110 1asyA1  b.40.4.1 * 4e-13 10.4 %
:HMM:SCOP  12->293 1m65A_ c.6.3.1 * 1.6e-26 25.4 %
:RPS:PFM   16->173 PF02811 * PHP 6e-10 32.4 %
:RPS:PFM   333->769 PF07733 * DNA_pol3_alpha e-111 50.5 %
:HMM:PFM   325->769 PF07733 * DNA_pol3_alpha 7e-154 49.2 421/422  
:HMM:PFM   14->205 PF02811 * PHP 3e-41 33.9 168/175  
:BLT:SWISS 4->1194 DPO3A_MYCTU 0.0 66.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55010.1 GT:GENE BAF55010.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2212352..2215936) GB:FROM 2212352 GB:TO 2215936 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55010.1 LENGTH 1194 SQ:AASEQ MARLSHMAKQSSFVHLHNHTEFSMLDGMAKIDMLADEVKAQGMPAVGITDHGNMYGSNPFYRKMTEMGIKPIIGIETYMAPESRFKKERVRWGEPHQKSDDVSGSGAYLHQTMLAENTTGLRNLFYLSSMASYEGQLGKWPRMDADIIAERAEGIIATTGCPSGDVQTRLRLGQFDEALEAAAMWQDIYGRDNYFLELMDHGLDIETRVRSELLEIGRKLNLPPLVTNDCHYVLESQAQAHEAMLCVQTGKTLHDEDRFKFGGTGYYVKSAEQMRALWDDMVPDGCDNTLWIAERVQSYDEIWEEHSHDRMPIADVPEGHTPTSWLHHEVMAGLKDRFSGQQVPEDYIERAEYEISVIDMKGYPSYFLIVAELIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPMEHGLLFERFLNPERPSAPDIDIDFDDRRRGEMIRYAADRWGEDKIAQVITFGTVKTKQALKDSARVQMGQPGYQIADRVIKELPPAIMAKDIPLSGITDPDHPRFNEAGAVRQLIETDPDVKRIYDTARGLEGVVRQSGVHACAVIMSSVPLLDCIPMWKRPADGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDAIENIKANRDGEVLDLENLAIEDEETYKLLGRGETLGVFQLDGGGMQELLKRMQPTGFNDIVAALALYRPGPMGVNAHWDYADRKNGRKPITPIHPELEEALEEILGETYGLIVYQEQIMRISQKVANYTAGQADGFRKAMGKKKPEVLEKEFANFEGGMKANGYSDAAIKTLWDTILPFAGYAFNKSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVGDNKDKSAIYLSDCRHLGIRVLSPDINESSLNFLPVGTDIRYGLGAIRNVGAEVVDSILDTRKEKGLFKDFSDYLDKIDTLPCNKRITESLIKGGAFDSLGHARKGLMLVFEDAVDSVIATKKAADKGQFDLFAAFDSDNNDDVASFFQITVPDDEWDRKHELALEREMLGLYVSGHPLDGYEDAIAAQVDTALTTIVAGELKHGAEVTVGGIISGVDRRFSKKDGSPWAIVTIEDHNGASVELLVFNKVYSIVGSMIVEDNIILAKAHISIRDDRMSLFCDDLRVPELGPGNGQGLPLRLSMRTDQCTMSNIAKLKQVLVDNKGESDVYLNLIDGDNSTVMILGDHLRVNRSASLMGDLKATMGPGILG GT:EXON 1|1-1194:0| BL:SWS:NREP 1 BL:SWS:REP 4->1194|DPO3A_MYCTU|0.0|66.4|1183/1184| SEG 427->437|dididfddrrr| SEG 702->713|eleealeeilge| BL:PDB:NREP 1 BL:PDB:REP 13->1060|2hpiA|0.0|42.5|991/1143| RP:PDB:NREP 1 RP:PDB:REP 12->1178|3e0dA|0.0|39.8|1081/1148| RP:PFM:NREP 2 RP:PFM:REP 16->173|PF02811|6e-10|32.4|145/177|PHP| RP:PFM:REP 333->769|PF07733|e-111|50.5|418/428|DNA_pol3_alpha| HM:PFM:NREP 2 HM:PFM:REP 325->769|PF07733|7e-154|49.2|421/422|DNA_pol3_alpha| HM:PFM:REP 14->205|PF02811|3e-41|33.9|168/175|PHP| GO:PFM:NREP 4 GO:PFM GO:0003824|"GO:catalytic activity"|PF02811|IPR004013| GO:PFM GO:0005737|"GO:cytoplasm"|PF07733|IPR011708| GO:PFM GO:0006260|"GO:DNA replication"|PF07733|IPR011708| GO:PFM GO:0008408|"GO:3'-5' exonuclease activity"|PF07733|IPR011708| RP:SCP:NREP 6 RP:SCP:REP 16->57|2anuA1|7e-05|32.5|40/224|c.6.3.1| RP:SCP:REP 43->186|1q16B|6e-17|11.2|143/509|d.58.1.5| RP:SCP:REP 315->464|1r8nA|2e-27|12.7|142/185|b.42.4.1| RP:SCP:REP 439->539|1fc3A|2e-08|11.0|91/119|a.4.6.3| RP:SCP:REP 721->897|1kitA2|3e-42|8.2|170/197|b.29.1.8| RP:SCP:REP 990->1110|1asyA1|4e-13|10.4|115/137|b.40.4.1| HM:SCP:REP 12->293|1m65A_|1.6e-26|25.4|228/0|c.6.3.1|1/1|PHP domain-like| OP:NHOMO 1297 OP:NHOMOORG 915 OP:PATTERN -------------------------------------------------------------------- 3222222222222222222-22112222222222222222223232222211242221112222113232111112111111211111111111111112131224141311111111111111111111-11111111111111222212221122111111222122221111111111112111111131111111111111112111111211111121111111111121111111111111112422121111111212222122111111111111111111111111111111111212211121111111111121121232222212112111213111112112111111212221112111212322211111222223222222222122221213122223222322-3442332333232322232221222221111111124221211111111111111111111111111111111222212221242532232222333223222224222221122223422222231222211111111111111222222131111111111121211112122222212111111111111111111111111122111222121112111111111112112111111122111111111111111111111111-11111111111111111111111111111111111111211111111111111112112222111111111111111121211111111111-11111111111111111222222222222222221111111111111111111222222222222222111111111111111111111111111111-11111111111111111111211121222121 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--------------3---------- --------------1-----------------------------------------------------------------1---------------------------------------------1------------------------------------------------ STR:NPRED 1156 STR:RPRED 96.8 SQ:SECSTR ###HHHHHHHHcccccccccTTcTTTccccHHHHHHHHHHHcccEEEEEEETccTTHHHHHHHHHTTTcEEEEEEEEEEEcccTTccccEEEEEHHHHHHHHEEcccEEEEEEEEccHHHHHHHHHHHHHHHHTcccccTcEEcHHHHHHTcTTEEEEcccTTcHHHHHHHTTcHHHHHHHHHHHHHHHGEGGEEEEEcccccHHHHHHHHHHHHHHHHTTccEEEccccccccGGGHHHHHHHHHHHTTccccccccccccccccccccHHHHHHHccHHccHHHHHHHHHHHTcccccccTTcccc#ccccccccccccHHHHHHHHHHHHHHHHcTTcccHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHTTTcccccccGGGGGcHHHHHTTcccccTTTTTccHHHHccTTcccccccEEEEETTTHHHHHHHHHHHHcTTTEEEEEEEccccHHHHHHHHHHH#TTcc#HHHHHHHHTTcccccHHTTcccccccccTTTTTcccTTTTTHHHHcHHHHHHHHHHHHcTTccccEEEcccEEEEccccGGGTccEEEGcTTccEEEEEEHHHHHTTTcEEEEEEEEHHHHHHHHHHHHHHHHHEcccccGGGccTTcHHHHHHHHTTccTTcTTcccHHHHHHHHHHccccHHHHHHHHHHccTTGGGHHHHHHHHHHHTTccccccTTTTTHHHHHHHHGGGTTccccHHHHHHHHHHHccccHHHHHHHHHHHHHTcTTTHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHTTTcHHHHHHHHHHHHTTcccEEcccTTTcccccEEETTEEEcccTTcccccHHHHHHHHHHHHHccccccHHHHHHHccTTTccHHHHHHHHHHTTTGGGcccHHHHHHHHHHHHHHHHHHHHHHTTcccccccccccccccccccccHHHcccccccHHHHHHHHHHHHcccccccGGGTcHHHHHccccGGGHHHHHcccccccEEEEEEEEccccEEEEETTETEEEEccTTETTE#EcEEEEEEEEccEEEEccHHHHTTccccEEEEcTccEEEEEEEEEE##############EEEEEcccccTTccHHHHHHHTcEEEEEEEEEEEccccEEEEEEEEE#EEccTH################ DISOP:02AL 1-13,1046-1046| PSIPRED cccccccccccccEEEEcccHHHHHHHHccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHcccEEEEEEEEEEEccccccHHHHcccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHcccEEEEccccccHHHHHHHcccHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEcccHHHccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccEEEEccccHHEEEEEEEccccccEEEEEcHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHcccccccHHHcccccHHHHHHHHcccEEEEEEcccHHHHHHHHHcccccHHHHHHHHHcccccccccccccHHHHHccccccccccccccHHHHHHHHcccccEEEHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEEcccccccccEEEEEccEEEEcHHHcccccHHHHHHHHHHHHHccccccHHHHHHHcccccccHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHEEEEcccHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEEEEEEEEEcccccccEEEEEEEEcccccEEEEEEEHHHHHHHHHHHccccEEEEEEEEEEEccEEEEEEEEEEcccccHHHHcccEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEEcccEEEEEEEccccEEEEcHHHHHHHHHHHcccccc //