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Corynebacterium glutamicum R (cglu2)
Gene : BAF55165.1
DDBJ      :             hypothetical protein
Swiss-Prot:HRCA_CORGB   RecName: Full=Heat-inducible transcription repressor hrcA;

Homologs  Archaea  0/68 : Bacteria  568/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.5d.110.2
:342 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->311 1stzA PDBj 2e-20 27.6 %
:RPS:PDB   3->110 3by6C PDBj 2e-06 10.6 %
:RPS:SCOP  7->77 1hqcA1  a.4.5.11 * 7e-14 30.8 %
:RPS:SCOP  94->339 1stzA2  d.110.2.3 * 1e-45 18.9 %
:HMM:SCOP  4->90 1stzA1 a.4.5.51 * 1.9e-21 35.6 %
:HMM:SCOP  74->343 1stzA2 d.110.2.3 * 1.9e-56 38.6 %
:RPS:PFM   5->81 PF03444 * DUF293 1e-13 57.5 %
:RPS:PFM   105->325 PF01628 * HrcA 3e-26 40.3 %
:HMM:PFM   105->325 PF01628 * HrcA 6.4e-61 42.1 221/224  
:HMM:PFM   37->64 PF08279 * HTH_11 1.3e-06 39.3 28/55  
:BLT:SWISS 1->342 HRCA_CORGB e-178 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55165.1 GT:GENE BAF55165.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2385563..2386591) GB:FROM 2385563 GB:TO 2386591 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55165.1 LENGTH 342 SQ:AASEQ MVSATEKRRYEVLRAIVADYIASQEPVGSKSLLERHKLNVSSATIRNDMSVLESDGFIVQEHASSGRVPTERGYRLFVDSIHDIKPLSLAERRAILGFLEGGVDLEDVLRRSVQLLSQLTHQAAVVQLPTLKTARVKHCEVVPLSPMRLLLVLITDTGRVDQRNVELEEPLAAEEVNVLRDLLNGALGEKTLTAASDALEELAQQAPTDIRDAMRRCCDVLVNTLVDQPSDRLILAGTSNLTRLSRETSASLPMVLEALEEQVVMLKLLSNVTDLDQVRVHIGGENEDIELRSATVITTGYGSQGSALGGLGVVGPTYMDYSGTISKVSAVAKYVGRVLAGE GT:EXON 1|1-342:0| SW:ID HRCA_CORGB SW:DE RecName: Full=Heat-inducible transcription repressor hrcA; SW:GN Name=hrcA; OrderedLocusNames=cgR_2163; SW:KW Complete proteome; Repressor; Stress response; Transcription;Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->342|HRCA_CORGB|e-178|100.0|342/342| GO:SWS:NREP 3 GO:SWS GO:0006950|"GO:response to stress"|Stress response| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| SEG 164->179|nveleeplaaeevnvl| BL:PDB:NREP 1 BL:PDB:REP 8->311|1stzA|2e-20|27.6|279/323| RP:PDB:NREP 1 RP:PDB:REP 3->110|3by6C|2e-06|10.6|104/120| RP:PFM:NREP 2 RP:PFM:REP 5->81|PF03444|1e-13|57.5|73/76|DUF293| RP:PFM:REP 105->325|PF01628|3e-26|40.3|221/224|HrcA| HM:PFM:NREP 2 HM:PFM:REP 105->325|PF01628|6.4e-61|42.1|221/224|HrcA| HM:PFM:REP 37->64|PF08279|1.3e-06|39.3|28/55|HTH_11| GO:PFM:NREP 4 GO:PFM GO:0003677|"GO:DNA binding"|PF03444|IPR005104| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF03444|IPR005104| GO:PFM GO:0003677|"GO:DNA binding"|PF01628|IPR002571| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01628|IPR002571| RP:SCP:NREP 2 RP:SCP:REP 7->77|1hqcA1|7e-14|30.8|65/76|a.4.5.11| RP:SCP:REP 94->339|1stzA2|1e-45|18.9|228/236|d.110.2.3| HM:SCP:REP 4->90|1stzA1|1.9e-21|35.6|87/87|a.4.5.51|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 74->343|1stzA2|1.9e-56|38.6|236/236|d.110.2.3|1/1|GAF domain-like| OP:NHOMO 570 OP:NHOMOORG 569 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-111111111111111111111111111111-1111111--111111111111111111-1111-------------------------1-1111111111111111111111111111111111111111111111111111111111111-1-----1---------11111111111111111111111111111111111111111111111111111111111111111111111111-111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111-1111-1111111111111111111111111111-11111111111-11111111111111-1111111111111111111111111111------------------------------1111111111111111111111111111111-1111111111111111111111111111111-------111111-----111-1-111-111111111111111-1---------------------1-1-11---------------------------------1111--------------------------------------------------------------------------------------------1---------11--------------------------------------------------------1--------------11111111111111----111111----------111111-11111111111111-11111111111111--- -----------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 83.0 SQ:SECSTR ##cccccHHHHHHHHHHHHHHTTcccTTcccccHHHHHTccHHHHHHHHHHHHHTTcEEEETTTEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHTHHHHHHHHHTcEEEEEcccGGGccccEEEEEEccccEEEEEEEETTEEccccccHHHHHHHHHHHHTTccHHHHHHTccGGGGccHHHH####################HHHHHHTcccccEEEEcHHHHHHcTTccHHHHHHHHHHTTcHHHHHHHcc#####cccEEEEGGGGccGGGTTEEEEEEEEEETTEEEEEE############################### DISOP:02AL 1-6,8-9,86-97,342-343| PSIPRED ccccccHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccEEEEEcccccccEEEEEEEEEEcccEEEEEEEccccEEEEEEEEccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccEEEEEEEccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccc //