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Corynebacterium glutamicum R (cglu2)
Gene : BAF55267.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  135/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:259 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->130 1pb6A PDBj 6e-09 32.2 %
:RPS:PDB   26->221 3c2bA PDBj 5e-21 14.4 %
:RPS:SCOP  28->94 1t33A1  a.4.1.9 * 6e-14 33.3 %
:RPS:SCOP  102->186 2d6yA2  a.121.1.1 * 5e-13 25.3 %
:HMM:SCOP  24->102 2fbqA1 a.4.1.9 * 3.9e-13 35.4 %
:HMM:SCOP  98->224 2fx0A2 a.121.1.1 * 3.1e-25 37.7 %
:RPS:PFM   32->74 PF00440 * TetR_N 5e-06 41.9 %
:HMM:PFM   33->76 PF00440 * TetR_N 1.4e-14 38.6 44/47  
:BLT:SWISS 30->130 YERO_BACSU 3e-09 27.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55267.1 GT:GENE BAF55267.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 2493807..2494586 GB:FROM 2493807 GB:TO 2494586 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55267.1 LENGTH 259 SQ:AASEQ MATSHRDAENLDQAGSEFTESDSGHTATPEEVVATALTFFAENGFSETKLEKIAKASGMSKRMIHYHFGDKKGLYIKAVSYALRLLRPEAEAMQLDSAVPVDGVRKIVEVLYTCITKHPEAVRLLLMENLHSKDSVDSTAAYSDESNVLLNLDKLLMLGQDAGAFRPGISAEDVLVLISSLAYFRVSNKVTLKNLYSLDLESEANIEGMKRIVVDTVLAFLTSNIQNSGNSSYLVVGGKTAEPETDDTVYSFDTDVFEN GT:EXON 1|1-259:0| BL:SWS:NREP 1 BL:SWS:REP 30->130|YERO_BACSU|3e-09|27.7|101/289| SEG 149->158|llnldkllml| BL:PDB:NREP 1 BL:PDB:REP 40->130|1pb6A|6e-09|32.2|90/198| RP:PDB:NREP 1 RP:PDB:REP 26->221|3c2bA|5e-21|14.4|187/198| RP:PFM:NREP 1 RP:PFM:REP 32->74|PF00440|5e-06|41.9|43/47|TetR_N| HM:PFM:NREP 1 HM:PFM:REP 33->76|PF00440|1.4e-14|38.6|44/47|TetR_N| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 2 RP:SCP:REP 28->94|1t33A1|6e-14|33.3|66/88|a.4.1.9| RP:SCP:REP 102->186|2d6yA2|5e-13|25.3|83/118|a.121.1.1| HM:SCP:REP 24->102|2fbqA1|3.9e-13|35.4|79/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 98->224|2fx0A2|3.1e-25|37.7|122/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 201 OP:NHOMOORG 135 OP:PATTERN -------------------------------------------------------------------- -----111111111-----------------------121--------------11-----------1----------------------------------1-------------------------------1---------------11--------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------1----------------111--------4----1---3-----------2---1--2------3223212111232--1--------1--11111111-11------------------------------------1--------3223232222222522222122242221--1121-----12-33-----------------------------------------------------1---------------------------------------------------------------------------11---1-11111--1-1111-1--1-11---1111---------------------1-1---1----------------------------------------------------------1-11211112-2222-111-----------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 203 STR:RPRED 78.4 SQ:SECSTR ####################cccTHcHHHHHHHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHHHHccHHHHHHHHHHHHTcccccccccccccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHcccHHHHHHHHTHTHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHTTHHTGGGcTTTHHHTTccccccHHHHHHHHHHHHHHHHcc#################################### DISOP:02AL 1-31,224-241,259-260| PSIPRED cccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEcccccccccccccHHHHHHHHcc //