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Corynebacterium glutamicum R (cglu2)
Gene : BAF55401.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  539/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:375 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->364 1zvvA PDBj 3e-27 27.4 %
:RPS:PDB   13->363 1bdhA PDBj 2e-45 27.2 %
:RPS:SCOP  13->55 1bdhA1  a.35.1.5 * 1e-10 37.2 %
:RPS:SCOP  72->364 1rzrA2  c.93.1.1 * 8e-45 24.3 %
:HMM:SCOP  9->70 2bjcA1 a.35.1.5 * 1.2e-12 37.1 %
:HMM:SCOP  68->358 1bykA_ c.93.1.1 * 2.2e-47 35.3 %
:RPS:PFM   13->55 PF00356 * LacI 3e-04 51.2 %
:RPS:PFM   72->337 PF00532 * Peripla_BP_1 3e-29 36.3 %
:HMM:PFM   72->208 PF00532 * Peripla_BP_1 2.6e-15 25.7 136/279  
:HMM:PFM   252->339 PF00532 * Peripla_BP_1 2.1e-07 23.9 88/279  
:HMM:PFM   13->55 PF00356 * LacI 2.5e-16 48.8 43/46  
:BLT:SWISS 11->364 DEGA_BACSU 9e-35 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55401.1 GT:GENE BAF55401.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 2629559..2630686 GB:FROM 2629559 GB:TO 2630686 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55401.1 LENGTH 375 SQ:AASEQ MTDSGAHSDSKATIYDVAKVAGVSPSTVSRAFSQPGRVSFSTAEKIRNAARQVGYGRRVETPAFQRQNTGIIAMVAADASNPFFLEIFQGAQHAASTQGYTVALVDARESAIKSREVLDKIVPHADGLLLAASRMDSGEIHKVAREIPTVLISREVQGIPSVMVDNYDGAAKAVVHLVDQGCHSITYIAGPNKSWADATRWRGLVDAASSLAAAVEGGVASTSAISISRSVTVQPGRMRHLIKPKMNTISVDSPDFVGGRRAFEEWAKDRTDAVICFNDMVALGFIQQARLSGVRVPHDVAVVGFDNTEISVLSTPSLTTVAGPLRAVGRVATANLIALLKGMKAPLMAKPRELPTRLIVRESSLKTAVDLKRGS GT:EXON 1|1-375:0| BL:SWS:NREP 1 BL:SWS:REP 11->364|DEGA_BACSU|9e-35|32.7|321/337| SEG 203->221|glvdaasslaaaveggvas| BL:PDB:NREP 1 BL:PDB:REP 13->364|1zvvA|3e-27|27.4|321/332| RP:PDB:NREP 1 RP:PDB:REP 13->363|1bdhA|2e-45|27.2|320/338| RP:PFM:NREP 2 RP:PFM:REP 13->55|PF00356|3e-04|51.2|43/46|LacI| RP:PFM:REP 72->337|PF00532|3e-29|36.3|234/261|Peripla_BP_1| HM:PFM:NREP 3 HM:PFM:REP 72->208|PF00532|2.6e-15|25.7|136/279|Peripla_BP_1| HM:PFM:REP 252->339|PF00532|2.1e-07|23.9|88/279|Peripla_BP_1| HM:PFM:REP 13->55|PF00356|2.5e-16|48.8|43/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 13->55|1bdhA1|1e-10|37.2|43/56|a.35.1.5| RP:SCP:REP 72->364|1rzrA2|8e-45|24.3|263/272|c.93.1.1| HM:SCP:REP 9->70|2bjcA1|1.2e-12|37.1|62/0|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 68->358|1bykA_|2.2e-47|35.3|252/255|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 2789 OP:NHOMOORG 541 OP:PATTERN -------------------------------------------------------------------- 7662U-1368A----11--------A------111123486-24BQC-7863LNJ--5--4257H2EDHB4B777BDF1---3-----111--1-----1-6-319-729--------------------------55442---9----------------------1-1-------------23111BA-8668887857B7878677BA886678647B27456776674H5--1-1111111-1141214634-43171-25533333344444344446434233333332333333333223333333344--155545316722222224241411344554111213--------F1-487761--1-18552-----1-323--------22222222224---1--21147--A895FBDIIED9215122853423522--------31111--1------------------------------1212-2221257877562222667B3233366682242--3327-51132614B-------1----------------1----1--3------------------9-----------------------------8866-76-72553434233223-2132-13-------------BD8C5DA7778789876-7757A87787787776777CFC675559988999999879878H76777763-B88877888888---------------758444424111112222------1---3533331426-2223-544----------877799999A76BB5574644555------------------------4-------------------------346513B443-1- -------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 365 STR:RPRED 97.3 SQ:SECSTR #####TTcTTcccHHHHHHHHTccHHHHHHHHHTcccccHHHHHHHHHHHHHHTccccHHHHHHHHTcccEEEEEEcccccHHHHHHHHHHHHHHHHTTcEEEEEEcTTcHHHHHHHHHHHHHTccEEEEccccccHHHHHHHHTTccEEEccccccccEEEEccHHHHHHHHHHHHHHTTcccEEEEcccTTcHHHHHHHHHHHHHHHHTHHHHHHHHcTTcHHHHHHHHHHHHHHHHTTccccGGGcccccccHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHTTccTTTTcEEEEEEccTTGGGccccccEEEccHHHHHHHHHHHHHHHHHTccccccccEEEcccEEEccccccccccc##### DISOP:02AL 1-15,365-376| PSIPRED cccccccccccccHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHccccEEEEccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHcccccHHHccccccHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHcccccccEEEEEEEccHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEccccccccHHccccc //