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Corynebacterium glutamicum R (cglu2)
Gene : BAF55427.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  50/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:164 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   68->152 1jgsA PDBj 1e-06 27.1 %
:RPS:PDB   18->156 3bjaA PDBj 3e-12 16.3 %
:RPS:SCOP  34->155 2ethA1  a.4.5.28 * 1e-17 26.9 %
:HMM:SCOP  13->154 1jgsA_ a.4.5.28 * 9.7e-28 27.5 %
:RPS:PFM   58->105 PF01047 * MarR 1e-04 41.7 %
:HMM:PFM   46->104 PF01047 * MarR 2.6e-15 28.1 57/59  
:BLT:SWISS 42->152 PAPX_ECOLX 2e-08 28.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55427.1 GT:GENE BAF55427.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2661271..2661765) GB:FROM 2661271 GB:TO 2661765 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55427.1 LENGTH 164 SQ:AASEQ MTSENSESQEIWLTDEQQDVWLDVWTMRIGLPARLDAQLKEAAGVSHFEYFTMAQISMAPERRVRMSELAELSDMTLSHLSRVVTRLEKAGWVKRVPDPDDGRATVAVLTDSGWEKVKATAPGHVKEVRRLVFDDLTPEELKVMGTAMKKIVNRLDMSNRLPRV GT:EXON 1|1-164:0| BL:SWS:NREP 1 BL:SWS:REP 42->152|PAPX_ECOLX|2e-08|28.0|107/164| BL:PDB:NREP 1 BL:PDB:REP 68->152|1jgsA|1e-06|27.1|85/138| RP:PDB:NREP 1 RP:PDB:REP 18->156|3bjaA|3e-12|16.3|129/132| RP:PFM:NREP 1 RP:PFM:REP 58->105|PF01047|1e-04|41.7|48/59|MarR| HM:PFM:NREP 1 HM:PFM:REP 46->104|PF01047|2.6e-15|28.1|57/59|MarR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01047|IPR000835| GO:PFM GO:0005622|"GO:intracellular"|PF01047|IPR000835| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01047|IPR000835| RP:SCP:NREP 1 RP:SCP:REP 34->155|2ethA1|1e-17|26.9|119/140|a.4.5.28| HM:SCP:REP 13->154|1jgsA_|9.7e-28|27.5|138/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 122 OP:NHOMOORG 50 OP:PATTERN -------------------------------------------------------------------- ---15112222111-------1---3------132354341315521132212112----1242A224471------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 153 STR:RPRED 93.3 SQ:SECSTR ###########cHHHHcHHHHHHHHHHHHHHHHHHHHHTGGGHTccHHHHHHHHHHHHHHcTTcHcccEEHHHHHHccccTTHHHHHHHTTcEEEEEccccTTcEEEEEcHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccHHHHHHH DISOP:02AL 1-4,8-8,158-165| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccc //