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Corynebacterium glutamicum R (cglu2)
Gene : BAF55713.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.1.18b.1.6
:954 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   498->583 1fx0B PDBj 2e-04 32.5 %
:RPS:PDB   641->735 2a9dA PDBj 6e-05 10.5 %
:RPS:SCOP  639->720 1ehxA  b.1.18.13 * 3e-04 14.8 %
:RPS:SCOP  770->810 1ehxA  b.1.18.13 * 4e-04 12.2 %
:HMM:SCOP  551->637 1u2cA1 b.1.6.2 * 1.6e-11 37.9 %
:HMM:SCOP  639->724 1u2cA1 b.1.6.2 * 5.5e-08 29.1 %
:HMM:SCOP  726->815 1u2cA1 b.1.6.2 * 9.2e-14 31.5 %
:RPS:PFM   762->796 PF05345 * He_PIG 9e-04 57.1 %
:HMM:PFM   585->619 PF05345 * He_PIG 5.1e-08 40.0 35/49  
:HMM:PFM   672->706 PF05345 * He_PIG 1e-07 42.9 35/49  
:HMM:PFM   760->799 PF05345 * He_PIG 4.9e-11 50.0 40/49  
:BLT:SWISS 346->476 EFTS_ORITB 5e-04 30.6 %
:BLT:SWISS 589->719 SRAP_STAAW 1e-09 41.7 %
:REPEAT 3|549->617|637->705|724->796
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55713.1 GT:GENE BAF55713.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(2985092..2987956) GB:FROM 2985092 GB:TO 2987956 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55713.1 LENGTH 954 SQ:AASEQ MKIKKSASALSRSMRIGIATITSTAMLGGVLVAVPAHPLLPTTAVAQAQTVTNSAPIAMASGQVIDLALFENRVNPADKAKFLSALEAIRADAEYPGTPTETSKLDLTLLQGINLQLGTLNVPLLSLVKIEGNAGVLGASAAATTGDTASAAAGVLSDNGSINLGAHGSNSGVDTVLDLTDVLGNAGVDAITDGIIDELSLRIGAVSASAQRDGDQVTSEYALSNVDLTLNSPLVEGLVETLVGEDTANPGLGVQIDKLVDDVAGDSSVLSGVTGLLDGVLGILGDANNVDVELSTNIQGALKPLLAETLVSDAVSIDLASGQIRVNLEKLGGTSVVNPNTNLLNEAAVKKIENEVQTLLNQLLAKVRTAVEDGILATAVNVDLNVGLLGARLASVKLEGSLAQFLDGTADINVTLLGSINLSSLTNALKRVLAGVGEALEVAIDKVVDPLLNNVLDNVVSGTVAPLVGGIGELLADADILSITLNDQPNPLTGTLTNTAGRPNAKTGAIARPDEEFTVSALRINVLDGLIDLPLARATVNADADWTAPVGGPTIGKINDQSIDLGEEIESVTPKATPTDAKITVEGLPKGVEFKDGVISGEPEEAGTFPITVTVTDSADRTAKTTFTITVTDTSTPAVKPTIEAIGDQEIELGDPIDDVTPVVTPEGAEVSITGQPAGVTIVDGVISGTPTRAGNFNVTVTATNEGLTASTSFKITVTDPDSDVVAPTIAPIADAEGTEEKPITPIEVVVTPEEAVVDVDGLPKGVEYDSETGEISGTPEKGTEGSHQVTVTATNDGGDATETFTFVVKKDNNGGGDNGSGDNGSSDNGSSGSSDGTSNGSSDFLQQCLDSPAAGVAGLLVALGTVGAIAGPALEPLMKSIGAELDRALRNLTNASSGANQPEWVRNINRGLNDAANAVDHRMVSQALFATAALALISTPVLCGMDNSSSSSS GT:EXON 1|1-954:0| BL:SWS:NREP 2 BL:SWS:REP 346->476|EFTS_ORITB|5e-04|30.6|124/309| BL:SWS:REP 589->719|SRAP_STAAW|1e-09|41.7|127/2275| NREPEAT 1 REPEAT 3|549->617|637->705|724->796| SEG 42->52|ttavaqaqtvt| SEG 138->154|gasaaattgdtasaaag| SEG 265->286|gdssvlsgvtglldgvlgilgd| SEG 622->636|takttftitvtdtst| SEG 743->761|pitpievvvtpeeavvdvd| SEG 812->844|dnngggdngsgdngssdngssgssdgtsngssd| SEG 854->872|aagvagllvalgtvgaiag| BL:PDB:NREP 1 BL:PDB:REP 498->583|1fx0B|2e-04|32.5|80/467| RP:PDB:NREP 1 RP:PDB:REP 641->735|2a9dA|6e-05|10.5|95/369| RP:PFM:NREP 1 RP:PFM:REP 762->796|PF05345|9e-04|57.1|35/47|He_PIG| HM:PFM:NREP 3 HM:PFM:REP 585->619|PF05345|5.1e-08|40.0|35/49|He_PIG| HM:PFM:REP 672->706|PF05345|1e-07|42.9|35/49|He_PIG| HM:PFM:REP 760->799|PF05345|4.9e-11|50.0|40/49|He_PIG| RP:SCP:NREP 2 RP:SCP:REP 639->720|1ehxA|3e-04|14.8|81/94|b.1.18.13| RP:SCP:REP 770->810|1ehxA|4e-04|12.2|41/94|b.1.18.13| HM:SCP:REP 551->637|1u2cA1|1.6e-11|37.9|87/0|b.1.6.2|1/3|Cadherin-like| HM:SCP:REP 639->724|1u2cA1|5.5e-08|29.1|86/0|b.1.6.2|2/3|Cadherin-like| HM:SCP:REP 726->815|1u2cA1|9.2e-14|31.5|89/0|b.1.6.2|3/3|Cadherin-like| OP:NHOMO 8 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- ----------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11----------------1-----------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 25.9 SQ:SECSTR #################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################cccccccccEEEEEEccccccEEEEEccccTTccT###TcEEEEcccccEEEEccTTTTcEEcT###TcccccccccccccEEEEc#####################################################EEEEEEEEEEEEEEccTTccEEEEEEEcccEEcEEccccccTTcccccEEEEEEEETTcEEEEEEEEEETccccccccGGGccTcccccccEEEEEEEcTcccE#####EEEEEEEETTEEEEEEEETTEEEEEEEcccccEEccccccTTcEEEEEEEEcTTcEEEEEETT################################################################################################################################################## DISOP:02AL 1-11,946-955| PSIPRED ccccccHHHHHHEEEEEEEEEEcHHHccEEEEEEccccccccHHHcccEEEcccccEEEccccEEEEEEEcccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccEEEEEEEEEEEcccccEEEEEccccccccccccEEEEccccccccccccccccccEEEEEHHHccccccEEEEEEEccccccccccccccEEEcccEEEEEEcccccEEEEcccEEEccEEEEEEEcccccccEEEEEEEEEccccccEEEEEEEHHHccHHHEEcccEEcccEEEEEEcccccccccccEEcccEEEEEccccEEEEEEEEEccccccccccEEEEEEcccEEEEEEccccccccEEEEEEEccEEEEEEEEEEEEEEEEEEEcccccccccccccccEEEEEEcccccccccccccccEEEEEccccEEEEEEEcccccEEEEEEcccccccEEEEcccccccccccccEEEEEccccccccEEEEEEEEEEEcccccccccccEEEEccEEEEEEcccccccEEEEEEEEEccccccEEccEEEEccccccccccEEEEEEccccccEEEEEcccccccEEEcccEEEEEccccEEEEEEEEEEcccccccEEEEEEEEEcccccccccccccccccEEEEEEEccccEEEEccccEEEEEcccccEEEEEccEEEEEEEcccEEEEEEEEEcccccEEEEEEEEEEcccccccccccEEcccccccccccEEEEEEEccccEEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEEEEcccccEEEEEEEEEEccccccccccccccEEcccccccEEEEEEcccccEEEEEEcccccccccEEEEEEEEEcccccccccEEEEEcccccccccEEEcccccccccEEEEEEEccccccccEEEEEEEHHHHHHHHHHHHHcccEEEEccccccccc //