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Corynebacterium glutamicum R (cglu2)
Gene : BAF55743.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  194/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.142.1b.35.2
:289 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->51 1l1cA PDBj 7e-06 44.4 %
:BLT:PDB   60->282 1h99A PDBj 2e-20 27.5 %
:RPS:PDB   1->54 1auuA PDBj 9e-14 27.8 %
:RPS:SCOP  1->54 1auuA  b.35.2.1 * 1e-13 27.8 %
:RPS:SCOP  56->169 1h99A1  a.142.1.1 * 7e-14 30.8 %
:RPS:SCOP  176->282 1h99A2  a.142.1.1 * 2e-14 20.0 %
:HMM:SCOP  1->55 1auuA_ b.35.2.1 * 1.5e-14 54.5 %
:HMM:SCOP  53->174 1h99A1 a.142.1.1 * 3.1e-15 31.3 %
:HMM:SCOP  176->282 1h99A2 a.142.1.1 * 3.5e-17 27.1 %
:RPS:PFM   16->54 PF03123 * CAT_RBD 7e-09 48.7 %
:RPS:PFM   75->168 PF00874 * PRD 5e-08 40.0 %
:RPS:PFM   187->280 PF00874 * PRD 1e-07 29.8 %
:HMM:PFM   75->169 PF00874 * PRD 5.1e-10 33.3 87/90  
:HMM:PFM   188->279 PF00874 * PRD 3.9e-14 27.3 88/90  
:HMM:PFM   1->57 PF03123 * CAT_RBD 1.1e-18 42.1 57/59  
:BLT:SWISS 16->282 LICT_BACSU 3e-32 28.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55743.1 GT:GENE BAF55743.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(3017544..3018413) GB:FROM 3017544 GB:TO 3018413 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55743.1 LENGTH 289 SQ:AASEQ MKVLRVLNNNVVLAIKDGAEVVLTGWGVGFQKKPGEDVDQSKVTQVFVPENNRDADHMASLLAEVPLEYLDLSTELIASVSAELDSPVGSATVVALADHLQMAVKRNGLEPELTSKPNPLSAEVHHLYPEETRLATEILERTNNWLAEKGTPPLPPAEVVAISLHLVNAGFRTEDLAETYVMTGVFEQLFEVIDSSFGITLDRQSVNAARFITHMRYFFVRVHHDGQLNDGMSVLRNSLEISHPDSVACAERLSQILSLRLGAELSSDEQTYLALHVARLAEDRGTTAD GT:EXON 1|1-289:0| BL:SWS:NREP 1 BL:SWS:REP 16->282|LICT_BACSU|3e-32|28.8|257/277| SEG 3->13|vlrvlnnnvvl| BL:PDB:NREP 2 BL:PDB:REP 16->51|1l1cA|7e-06|44.4|36/55| BL:PDB:REP 60->282|1h99A|2e-20|27.5|211/220| RP:PDB:NREP 1 RP:PDB:REP 1->54|1auuA|9e-14|27.8|54/55| RP:PFM:NREP 3 RP:PFM:REP 16->54|PF03123|7e-09|48.7|39/58|CAT_RBD| RP:PFM:REP 75->168|PF00874|5e-08|40.0|85/90|PRD| RP:PFM:REP 187->280|PF00874|1e-07|29.8|89/90|PRD| HM:PFM:NREP 3 HM:PFM:REP 75->169|PF00874|5.1e-10|33.3|87/90|PRD| HM:PFM:REP 188->279|PF00874|3.9e-14|27.3|88/90|PRD| HM:PFM:REP 1->57|PF03123|1.1e-18|42.1|57/59|CAT_RBD| GO:PFM:NREP 4 GO:PFM GO:0003723|"GO:RNA binding"|PF03123|IPR004341| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF03123|IPR004341| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00874|IPR011608| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00874|IPR011608| RP:SCP:NREP 3 RP:SCP:REP 1->54|1auuA|1e-13|27.8|54/55|b.35.2.1| RP:SCP:REP 56->169|1h99A1|7e-14|30.8|107/115|a.142.1.1| RP:SCP:REP 176->282|1h99A2|2e-14|20.0|105/105|a.142.1.1| HM:SCP:REP 1->55|1auuA_|1.5e-14|54.5|55/0|b.35.2.1|1/1|SacY-like RNA-binding domain| HM:SCP:REP 53->174|1h99A1|3.1e-15|31.3|115/115|a.142.1.1|1/2|PTS-regulatory domain, PRD| HM:SCP:REP 176->282|1h99A2|3.5e-17|27.1|107/107|a.142.1.1|2/2|PTS-regulatory domain, PRD| OP:NHOMO 333 OP:NHOMOORG 194 OP:PATTERN -------------------------------------------------------------------- -----11-112-1----------------------------------------11--------1-------1---211------------------------------------------------------------------------------------------------------------------23111111122111111435564211121-123122313111111111111111111111113--33--4-344--25--121-11-112221221122222222212111111111111122111-2222---434445335232-9--1111-------------1------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------132-2-1--2122211--1111221---2-11111112144111----------------111-1111--1--------------------------------1----------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 267 STR:RPRED 92.4 SQ:SECSTR cEEcccccccEEEEEccccEEEEEcTTccTTccTTccccTTTccEEEEcccccc#####cccccccHHHHHHHHHHHHHHHHHHcccccTHHHHHHHHHHHHHHHHHTcccc#####cTTHHHHHHHTHHHHHHHHHHHHHHHH####HHcccccHHHHHHHHHHHHHHHT#TcccHHHHHHHHHHHHHHHHHHHHHTccccTTcHHHHHHHHHHHHHHHHHHHTcccccTcTHHHHHHHHHTHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHc####### DISOP:02AL 175-176,282-290| PSIPRED cEEEEEEccEEEEEEEccEEEEEEEccHHccccccccccHHHEEEEEEEcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccc //