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Corynebacterium glutamicum R (cglu2)
Gene : BAF55796.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  52/915 : Eukaryota  46/199 : Viruses  0/175   --->[See Alignment]
b.34.3d.118.1
:705 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   294->387 1yckA PDBj 9e-17 45.6 %
:RPS:PDB   265->459 2cb3A PDBj 2e-29 26.3 %
:RPS:SCOP  47->91 2mysA1  b.34.3.1 * 6e-04 47.6 %
:RPS:SCOP  266->463 1ohtA  d.118.1.1 * 1e-31 26.6 %
:HMM:SCOP  265->466 1sxrA_ d.118.1.1 * 3.5e-45 39.3 %
:RPS:PFM   291->403 PF01510 * Amidase_2 2e-06 35.7 %
:HMM:PFM   290->444 PF01510 * Amidase_2 1.2e-23 38.5 117/130  
:HMM:PFM   626->664 PF08310 * LGFP 8.9e-09 38.5 39/54  
:HMM:PFM   3->42 PF05137 * PilN 0.00057 37.5 40/162  
:BLT:SWISS 268->443 PGSC2_DROME 7e-20 38.8 %
:BLT:SWISS 609->691 CSP1_CORGL 5e-05 40.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55796.1 GT:GENE BAF55796.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 3082311..3084428 GB:FROM 3082311 GB:TO 3084428 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55796.1 LENGTH 705 SQ:AASEQ MQQRRRISETRKKPMLAIILTAVLGASGLAAAGTQYLNTQGEGIGPVAVQNDSESFNSGTNVVVEDAAVTAQGEGGGARTVKEFQRDQQFSSFALTWTGKKDITAFVRAEQEDGTWSQWYDLEPMVNEDQGTNGTELIWHGPTNKIQVSTLNVDLFGADAAAADENGQDIPAVDAAEAAPAAEPAPAEAPVEEAPAPIAEPAPAAEPIAEPVADYSANDGLAPLPSNYGDIQPVADVDDGLNAVFIDGNADAGVGIANVADTDGMPKVISRAGWGADESLRCSNPTIDDGVSAITIHHTAGSNNYTEAQAAAQVRGAYSYHAKTLGWCDIGYQSLVDKFGNIYEGRAGGMTKAVQGAHAGGFNQNTWAISMMGDYSTVVPSDATINAVGELAGWRAKVAGFDPTGSDSHYSEGTSYAKYSYGTRVTLPNIFAHRDVGLTSCPGDAGYRQMDRIRQIAKAKYTSLQNGNTGGTTTAASTPKETSTSNAPSTTTAQPVTPAEPQQSSEADVLAALLTGGSSGGTDLLNGANSEQLLTGLGSIAAVLIAASLADGGLNGLISNVGSNNGVPVLGDIKITDVIPIVDTVINLTGDNKYSRGWNDLNNTLGPVLGAATGGETTVKYTSDQNSEVTFVPFENGIMVSSPEAGTHGLWGAIGDAWAQQGADLGPLGLPTSNQYQSGDLLRVDFQNGYITYDSATGQASIQLN GT:EXON 1|1-705:0| BL:SWS:NREP 2 BL:SWS:REP 268->443|PGSC2_DROME|7e-20|38.8|147/184| BL:SWS:REP 609->691|CSP1_CORGL|5e-05|40.8|76/657| TM:NTM 2 TM:REGION 14->34| TM:REGION 531->553| SEG 20->33|ltavlgasglaaag| SEG 169->214|dipavdaaeaapaaepapaeapveeapapiaepapaaepiaepvad| SEG 466->474|ngntggttt| SEG 482->493|tstsnapsttta| SEG 510->527|laalltggssggtdllng| SEG 536->550|glgsiaavliaasla| SEG 572->586|dikitdvipivdtvi| BL:PDB:NREP 1 BL:PDB:REP 294->387|1yckA|9e-17|45.6|90/167| RP:PDB:NREP 1 RP:PDB:REP 265->459|2cb3A|2e-29|26.3|167/170| RP:PFM:NREP 1 RP:PFM:REP 291->403|PF01510|2e-06|35.7|98/129|Amidase_2| HM:PFM:NREP 3 HM:PFM:REP 290->444|PF01510|1.2e-23|38.5|117/130|Amidase_2| HM:PFM:REP 626->664|PF08310|8.9e-09|38.5|39/54|LGFP| HM:PFM:REP 3->42|PF05137|0.00057|37.5|40/162|PilN| GO:PFM:NREP 2 GO:PFM GO:0008745|"GO:N-acetylmuramoyl-L-alanine amidase activity"|PF01510|IPR002502| GO:PFM GO:0009253|"GO:peptidoglycan catabolic process"|PF01510|IPR002502| RP:SCP:NREP 2 RP:SCP:REP 47->91|2mysA1|6e-04|47.6|42/46|b.34.3.1| RP:SCP:REP 266->463|1ohtA|1e-31|26.6|169/173|d.118.1.1| HM:SCP:REP 265->466|1sxrA_|3.5e-45|39.3|173/0|d.118.1.1|1/1|N-acetylmuramoyl-L-alanine amidase-like| OP:NHOMO 217 OP:NHOMOORG 98 OP:PATTERN -------------------------------------------------------------------- -----1111111--11111-11--1111111111212111111-31--1-------1-----2-1-2323------------------------------------------------------------------11111---31-------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------722-1222-1-13234-626D4-547111121142-132-41131--23----44--834F---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 197 STR:RPRED 27.9 SQ:SECSTR ####################################################################################################################################################################################################################################################################cccccTTcccGGGGTcccccccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHTcccccccccEEEcTTccEEEcccccccTTccccccTTTGGGEEEEEEccccccccccHHHHHHHHHHHHHHHHHTcEEEHHHHHTTcEEEEETcEEEEEE##EEEEEEGGGTccccTTcHHHHHHHTTcTTcccc###################################################################################################################################################################################################################################################### DISOP:02AL 1-10,183-188,471-490,500-507| PSIPRED cccHHHHHHcccccHHHHHHHHHHHHccHHcccccEEEEcccccccccccccccccccccEEEEEcHHHHcccccccccEEEEEccccccEEEEEEEccccccEEEEEEEcccccccccEEccccccccccccccccEEEcccccEEEEEEccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEcccccEEEcccccccccccccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHccccccccccEEccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHcccccccccccEEEEEEccccccEEEEccccHHHHHHHHcccccccccccccccccccccccccccccEEEEEcccEEEEccccccEEEEEHHHHHHHHcccccccccccccccEEEccEEEEEEcccEEEEEccccEEEEEEc //