[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF55828.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  751/915 : Eukaryota  179/199 : Viruses  0/175   --->[See Alignment]
a.127.1
:469 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->440 1jswB PDBj e-120 52.6 %
:RPS:PDB   7->440 3e04A PDBj e-108 38.6 %
:RPS:SCOP  9->433 1fuoA  a.127.1.1 * e-118 41.1 %
:HMM:SCOP  8->471 1j3uA_ a.127.1.1 * 4.5e-155 41.6 %
:RPS:PFM   22->346 PF00206 * Lyase_1 2e-53 43.8 %
:HMM:PFM   17->347 PF00206 * Lyase_1 7.5e-106 50.0 308/312  
:HMM:PFM   413->466 PF10415 * FumaraseC_C 1.6e-20 53.7 54/55  
:BLT:SWISS 6->440 ASPA_PSEAE e-132 55.6 %
:PROS 322->331|PS00163|FUMARATE_LYASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55828.1 GT:GENE BAF55828.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 3118892..3120301 GB:FROM 3118892 GB:TO 3120301 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55828.1 LENGTH 469 SQ:AASEQ MTTTFSSTRTEHDLIGDAEVPAHVYWGVHTMRAAENFQITDQKLADNPFLIAALARVKQAAARANLQLGLLDQTRAEAIDQACDRVAAGEFNEQFILDPIQGGAGTSTNMNANEVIANVALEILGHEKGDYQHLHPNDHVNLSQSTNDAYPTAVKIATCFAARPLLDALTELEQACRSKAVEFRTVVKMGRTQLQDAVPMTVGQEFGGWAVTLREDHDRLEESLKLVTEINLGATAIGTGLNAPEGYAEAARKHLAELTALPLSTSPHLVEATSDVGAFVHLSGVLKRVAVKLSKICSDLRLLSSGPRAGLNDIQLPAVQSGSSIMPGKVNPVIPEVVNQIAYQVVGYDATVTMAAEGGQLQLNAFEPVIMHSIGLSMKHLANGCSTLARKCIAGITVDEDALRRQVEQSIGLVTALNPALGYTQSTMIAMEALHTGRGVAELVLERELLTEAELSELLRPERLANLAS GT:EXON 1|1-469:0| BL:SWS:NREP 1 BL:SWS:REP 6->440|ASPA_PSEAE|e-132|55.6|435/474| PROS 322->331|PS00163|FUMARATE_LYASES|PDOC00147| SEG 52->64|aalarvkqaaara| SEG 442->459|elvlerellteaelsell| BL:PDB:NREP 1 BL:PDB:REP 6->440|1jswB|e-120|52.6|435/460| RP:PDB:NREP 1 RP:PDB:REP 7->440|3e04A|e-108|38.6|428/456| RP:PFM:NREP 1 RP:PFM:REP 22->346|PF00206|2e-53|43.8|297/302|Lyase_1| HM:PFM:NREP 2 HM:PFM:REP 17->347|PF00206|7.5e-106|50.0|308/312|Lyase_1| HM:PFM:REP 413->466|PF10415|1.6e-20|53.7|54/55|FumaraseC_C| GO:PFM:NREP 1 GO:PFM GO:0003824|"GO:catalytic activity"|PF00206|IPR000362| RP:SCP:NREP 1 RP:SCP:REP 9->433|1fuoA|e-118|41.1|423/456|a.127.1.1| HM:SCP:REP 8->471|1j3uA_|4.5e-155|41.6|462/462|a.127.1.1|1/1|L-aspartase-like| OP:NHOMO 1687 OP:NHOMOORG 976 OP:PATTERN 11-1--1211111111-111---1111111111-2-1-11111-11----11-1----111111--11 1111122222322211111-11111211111111111246111112212222323111--21121132111-11111111111-1-2-1111-211--1322111111111-1-11-11111111---111---1111111111121111221212111111111111111111111111111112111---33555555453455555234443554-2331111111112122222222222222222222-112222-111221122-11211-----------------------------------------------1--23------------22-----1-221---1331-1-21111111---211111211112123111122121222222222221-3323322221112221233214112121111311121121111111111111111111111111111111111111111111-1111111122213333331222222233333322221211-2111-11122122222112111223333333111122212-2123-323321111111122221212142142122222221222222211--122333121211122222212----11---1222-21111-1----33223333333333333-333353333333333333333333333333333333333333333323333223222222222221121111112222222232222222222222223333312233323333345434343334311111111121113222223331111111111111111----222222--------1---------------------------11-211111111- ----211-----1121111111111111111111111111111111111113231111111111211112113121111112122111-12111111111111221-1112121-111112--111111171-11111111111-1111111111211221-12112512712331-12S222113--31311131113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 436 STR:RPRED 93.0 SQ:SECSTR #####ccEEEEEETTEEEEEETTccccHHHHHHHHHcccccGGGcccHHHHHHHHHHHHHHHHHGGGGTccHHHHHHHHHHHHHHHHTTccGGGccccccccTTcHHHHHHHHHHHHHHHHHHTTccTTcccccccccccTTTccHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTcEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHTcTTTcEEcTTcTTTcccTTccTTHHHHHHHHHHHHHTcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccccEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHTccTTccccHHHHHHHHHHHHHHHHHHHHHHHHHTGGGcEEcHHHHHHHHHHccGGGGGGHHHHcHHHHHHHHHHHHHHTccHH############################ DISOP:02AL 1-6,468-470| PSIPRED cccccccccEEEcccccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHccHHcccccHHHHHHHHHHHHHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHccHHHHccccc //