[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF55868.1
DDBJ      :             hypothetical protein
Swiss-Prot:OXAA_CORGL   RecName: Full=Membrane protein oxaA;

Homologs  Archaea  0/68 : Bacteria  216/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
a.59.1
:422 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   63->143 1e91A PDBj 2e-07 5.3 %
:RPS:SCOP  63->143 1e91A  a.59.1.1 * 8e-08 5.3 %
:RPS:PFM   32->269 PF02096 * 60KD_IMP 1e-19 37.3 %
:RPS:PFM   332->420 PF09433 * HRP1 3e-04 23.6 %
:HMM:PFM   32->270 PF02096 * 60KD_IMP 1.4e-36 29.5 190/196  
:HMM:PFM   329->400 PF01044 * Vinculin 0.00014 18.1 72/968  
:BLT:SWISS 1->422 OXAA_CORGL 0.0 99.3 %
:TM
:COIL

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55868.1 GT:GENE BAF55868.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION 3160043..3161311 GB:FROM 3160043 GB:TO 3161311 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55868.1 LENGTH 422 SQ:AASEQ MLDILIYPVSGVMKLWHLLLHNVAGLDDSLAWFFSLFGLVITIRAIIAPFTWQMYKSGRTAAHIRPHRAALREEYKGKYDEASIRELQKRQNDLNKEYGINPLAGCVPGLIQIPIVLGLYWALLRMARPEGGLENPVFQSIGFLTPEEVESFLAGRVSNVPLPAYVSMPTEQLEYLSTTQAEVLNFVLPLFITAAILTAINMAMSMYRSFQTNDYASGFSNGMLKFMIVMSILAPIFPLSLGLTGPFPTAIALYWVSNNLWTLLQTIIMMVILERKYPLTDDFKVHHLEQRDIYRAKQKEKRIFLWTRRKNRALMILTPWKASTLHATNVELTKTRTAEINEAKQARKEIANKRRETQREMNRAAMQRLKQRRAEVKAKKKGLIDASPNEDTPSENEETKLSSPQVEPTTTAEPNREPSQED GT:EXON 1|1-422:0| SW:ID OXAA_CORGL SW:DE RecName: Full=Membrane protein oxaA; SW:GN Name=oxaA; OrderedLocusNames=Cgl2940, cg3252; SW:KW Cell membrane; Complete proteome; Membrane; Transmembrane. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->422|OXAA_CORGL|0.0|99.3|422/422| GO:SWS:NREP 3 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| COIL:NAA 12 COIL:NSEG 1 COIL:REGION 356->367| TM:NTM 6 TM:REGION 1->23| TM:REGION 30->52| TM:REGION 102->124| TM:REGION 182->204| TM:REGION 226->248| TM:REGION 254->275| RP:PDB:NREP 1 RP:PDB:REP 63->143|1e91A|2e-07|5.3|76/85| RP:PFM:NREP 2 RP:PFM:REP 32->269|PF02096|1e-19|37.3|185/191|60KD_IMP| RP:PFM:REP 332->420|PF09433|3e-04|23.6|89/740|HRP1| HM:PFM:NREP 2 HM:PFM:REP 32->270|PF02096|1.4e-36|29.5|190/196|60KD_IMP| HM:PFM:REP 329->400|PF01044|0.00014|18.1|72/968|Vinculin| GO:PFM:NREP 2 GO:PFM GO:0016021|"GO:integral to membrane"|PF02096|IPR001708| GO:PFM GO:0051205|"GO:protein insertion into membrane"|PF02096|IPR001708| RP:SCP:NREP 1 RP:SCP:REP 63->143|1e91A|8e-08|5.3|76/85|a.59.1.1| OP:NHOMO 282 OP:NHOMOORG 229 OP:PATTERN -------------------------------------------------------------------- ----122222222211112-11111111111111111211-111111111111221-111111111211111111111----2--------------------------------------------------------11---------------------------------------------------212222222222222222211-1222211-1-1-1111---1-------------------111-----1-1------------------------------------------------------------------------------1---1-------1---1----------1--1------------1--------------------------------------------------------------1---------------------------------------------------11111111111111111111111111111111111111-----------11-----11------------11-------1--------------1-----------1----------------1------11-----11---------1--------------------------------------------------------------------------------------------------------------------------------1-1-111--111111-11-1-11------111----------11111111-----------------1-1-----1111----------11111111----------------------------------------- ------------------------------------------------------------------------------------------------------------2---------------------------------------------------------------------1822-1-2114-2-12----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 76 STR:RPRED 18.0 SQ:SECSTR ##############################################################HHHHHHHHHHHHTcc##cHHHHHHHHHHHHHH#HHTTccccccccccccHHHHHHHHHHHTccc##HHHHHHHHHHccccc####################################################################################################################################################################################################################################################################################### DISOP:02AL 75-89,204-223,285-314,346-423| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccccHHHHHHHHHHHHccccccccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccHHHHHccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccc //