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Corynebacterium glutamicum R (cglu2)
Gene : BAF55889.1
DDBJ      :             hypothetical protein
Swiss-Prot:RL9_CORGB    RecName: Full=50S ribosomal protein L9;

Homologs  Archaea  0/68 : Bacteria  713/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
d.100.1d.99.1
:150 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->149 1vs9G PDBj 3e-19 39.0 %
:RPS:PDB   2->149 3bboJ PDBj 3e-36 32.9 %
:RPS:SCOP  1->55 1divA2  d.100.1.1 * 4e-15 40.0 %
:RPS:SCOP  61->150 1divA1  d.99.1.1 * 6e-17 34.1 %
:HMM:SCOP  1->55 2j01I2 d.100.1.1 * 2.6e-15 56.4 %
:HMM:SCOP  56->151 1divA1 d.99.1.1 * 9.8e-21 42.9 %
:RPS:PFM   1->47 PF01281 * Ribosomal_L9_N 9e-08 57.4 %
:RPS:PFM   67->150 PF03948 * Ribosomal_L9_C 2e-10 47.0 %
:HMM:PFM   63->149 PF03948 * Ribosomal_L9_C 9.1e-27 44.7 85/87  
:HMM:PFM   1->48 PF01281 * Ribosomal_L9_N 2.8e-23 60.4 48/48  
:BLT:SWISS 1->150 RL9_CORGB 3e-79 100.0 %
:PROS 13->40|PS00651|RIBOSOMAL_L9

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55889.1 GT:GENE BAF55889.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(3186741..3187193) GB:FROM 3186741 GB:TO 3187193 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55889.1 LENGTH 150 SQ:AASEQ MKLILTAAVENLGVAGDIVEVKNGYGRNLLLPRGLAIVATPGAEKQIEGIKRAQEAREIRDLDHAREVKAALEALEGVTIAVRTSESGKLFGSVKTDDIVDAVKAAGGPNLDKRAIVLPKNLVKTTGKYQVEAKLTDGIVSRVKFEVVAA GT:EXON 1|1-150:0| SW:ID RL9_CORGB SW:DE RecName: Full=50S ribosomal protein L9; SW:GN Name=rplI; OrderedLocusNames=cgR_2869; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->150|RL9_CORGB|3e-79|100.0|150/150| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| PROS 13->40|PS00651|RIBOSOMAL_L9|PDOC00560| BL:PDB:NREP 1 BL:PDB:REP 1->149|1vs9G|3e-19|39.0|146/148| RP:PDB:NREP 1 RP:PDB:REP 2->149|3bboJ|3e-36|32.9|146/148| RP:PFM:NREP 2 RP:PFM:REP 1->47|PF01281|9e-08|57.4|47/48|Ribosomal_L9_N| RP:PFM:REP 67->150|PF03948|2e-10|47.0|83/87|Ribosomal_L9_C| HM:PFM:NREP 2 HM:PFM:REP 63->149|PF03948|9.1e-27|44.7|85/87|Ribosomal_L9_C| HM:PFM:REP 1->48|PF01281|2.8e-23|60.4|48/48|Ribosomal_L9_N| RP:SCP:NREP 2 RP:SCP:REP 1->55|1divA2|4e-15|40.0|55/55|d.100.1.1| RP:SCP:REP 61->150|1divA1|6e-17|34.1|88/94|d.99.1.1| HM:SCP:REP 1->55|2j01I2|2.6e-15|56.4|55/0|d.100.1.1|1/1|L9 N-domain-like| HM:SCP:REP 56->151|1divA1|9.8e-21|42.9|91/94|d.99.1.1|1/1|Ribosomal protein L9 C-domain| OP:NHOMO 747 OP:NHOMOORG 732 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111-11111111111111--111111111111111111-11----111111111111---1111-111111111111111111111111111111111111111111112111-1-------------------1---1----1--------11111111111111111111111-1-11-----111111--1------1-1-111---11111111111------------------------111111111111111111-1111-1-11-11111111111111111--1111111-11111111111111111111111111111-11111111111-11111111111--1--11111-111111111111111111111111-------1111111111111111111-111111111111111111111111111111111-111111111-1----111----111-11111111111-1-1-111111111111111111111111111111111111111111-11111111111--1111111-111111-1111-11111111111111-1111-1111111-1-1-11111111111-11111111111111111111111-11-1111111111111111111111111-11111111111111111-1--1111-1111---11--1111111-------1111-1----1111-111111111--------1111111111111111111111111111111111111111111111111-----1-----11--------------111--1---111 ------------------------------------------------------------------------------------------------------------------------1------1--1----3---1------------------------------------1-171111-4131-11--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 150 STR:RPRED 100.0 SQ:SECSTR ccccccccccccccccccccccccccccccTTTTccccccHHHHHHHHTTTHHHHGGGTTTTHHHHTHHHHccccccccccccccTTcccccccccHHHHGGGTcccccccccTTcccccccccccccEEEcccccTTccccEEEccccc PSIPRED cEEEEccccccccccccEEEEccccEEEEEcccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccEEEEcccHHHHHHHHHHHHccEEcHHHEEccccccccEEEEEEEEEEcccEEEEEEEEEEEc //