[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Corynebacterium glutamicum R (cglu2)
Gene : BAF55952.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  111/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:112 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->74 3f6vA PDBj 5e-07 38.5 %
:RPS:PDB   24->74 1bibA PDBj 3e-09 17.6 %
:RPS:SCOP  15->100 1r1uA  a.4.5.5 * 3e-10 18.6 %
:HMM:SCOP  1->95 1u2wA1 a.4.5.5 * 1.1e-15 33.7 %
:RPS:PFM   24->69 PF01022 * HTH_5 2e-04 45.7 %
:HMM:PFM   24->69 PF01022 * HTH_5 2.5e-11 45.7 46/47  
:BLT:SWISS 7->101 YCZG_BACSU 3e-17 38.9 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID BAF55952.1 GT:GENE BAF55952.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00498CH01 GT:ORG cglu2 GB:ACCESSION GIB00498CH01 GB:LOCATION complement(3252157..3252495) GB:FROM 3252157 GB:TO 3252495 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAF55952.1 LENGTH 112 SQ:AASEQ MARKLEHPSLAEMNLNAIMFALSDPIRRQILSQLSCGHNDQACVAFELPVSKSTSTHHFRVLREAGLITQRYEGTAILSALRSEDMEARFPGLLTSVMRAEVEERNAADLPV GT:EXON 1|1-112:0| BL:SWS:NREP 1 BL:SWS:REP 7->101|YCZG_BACSU|3e-17|38.9|95/104| BL:PDB:NREP 1 BL:PDB:REP 23->74|3f6vA|5e-07|38.5|52/96| RP:PDB:NREP 1 RP:PDB:REP 24->74|1bibA|3e-09|17.6|51/294| RP:PFM:NREP 1 RP:PFM:REP 24->69|PF01022|2e-04|45.7|46/47|HTH_5| HM:PFM:NREP 1 HM:PFM:REP 24->69|PF01022|2.5e-11|45.7|46/47|HTH_5| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01022|IPR001845| GO:PFM GO:0005622|"GO:intracellular"|PF01022|IPR001845| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01022|IPR001845| RP:SCP:NREP 1 RP:SCP:REP 15->100|1r1uA|3e-10|18.6|86/94|a.4.5.5| HM:SCP:REP 1->95|1u2wA1|1.1e-15|33.7|95/0|a.4.5.5|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 133 OP:NHOMOORG 111 OP:PATTERN -------------------------------------------------------------------- ----2---111--------------1------11111-2--4----14-----1------11--1-4141----------------------------------------------------------------------------1--1-----------------111-----------------------111111111-111111--1111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------211---11112------------11-11-111----2-211-21111---------------11111111-22-----------------------------------------111--------------1---------1--------------1------1--11-------------------------1------11-----------------------------------------------------------------------------------------1-------------------------------11111-----------------------------1------------------------------------------------------------2-11-1111-1-1------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 101 STR:RPRED 90.2 SQ:SECSTR ########HHHEEccHHHHHccHcHHHHHHHHHHTTccccHHHHHHHHTccHHHHHHHHHHHHHTTcccEEETTTEEEcccccccccHHHHHHTcccccEEEccccccH### DISOP:02AL 1-6| PSIPRED cccccccccHHHHcHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEEccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHccccc //