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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00004
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:1201 amino acids
:PSIPRED
:BLT:PDB   3->1198 3g60A PDBj e-151 38.1 %
:RPS:PDB   72->171 2bnlB PDBj 2e-07 2.0 %
:RPS:PDB   242->507 3b5jA PDBj 5e-51 40.7 %
:RPS:PDB   761->895 2bnlB PDBj 4e-07 7.4 %
:RPS:PDB   927->1184 3b5jA PDBj 1e-50 34.9 %
:RPS:SCOP  4->166 2hydA2  f.37.1.1 * 4e-10 11.7 %
:RPS:SCOP  217->283 1esmA  c.37.1.6 * 8e-05 12.2 %
:RPS:SCOP  256->503 1e69A  c.37.1.12 * 9e-41 18.7 %
:RPS:SCOP  584->904 2hydA2  f.37.1.1 * 5e-28 15.8 %
:RPS:SCOP  927->1155 1e69A  c.37.1.12 * 7e-38 13.0 %
:HMM:SCOP  1->224 1pf4A2 f.37.1.1 * 3.9e-19 22.5 %
:HMM:SCOP  242->503 1pf4A1 c.37.1.12 * 9.2e-56 37.2 %
:HMM:SCOP  561->942 1pf4A2 f.37.1.1 * 8.1e-43 22.2 %
:HMM:SCOP  889->1194 1xmiA_ c.37.1.12 * 1.8e-52 29.7 %
:RPS:PFM   4->150 PF00664 * ABC_membrane 4e-10 26.4 %
:RPS:PFM   326->448 PF00005 * ABC_tran 3e-13 43.4 %
:RPS:PFM   420->487 PF02463 * SMC_N 4e-05 38.2 %
:RPS:PFM   627->800 PF00664 * ABC_membrane 1e-14 27.8 %
:RPS:PFM   991->1114 PF00005 * ABC_tran 3e-10 33.6 %
:RPS:PFM   1086->1154 PF02463 * SMC_N 8e-04 26.0 %
:HMM:PFM   3->168 PF00664 * ABC_membrane 1.7e-20 31.3 166/275  
:HMM:PFM   592->880 PF00664 * ABC_membrane 2.2e-34 25.5 263/275  
:HMM:PFM   324->448 PF00005 * ABC_tran 1.3e-18 28.6 105/118  
:HMM:PFM   981->1114 PF00005 * ABC_tran 9.7e-20 27.0 111/118  
:HMM:PFM   419->490 PF02463 * SMC_N 4.9e-06 33.3 72/220  
:HMM:PFM   258->292 PF03193 * DUF258 3.8e-05 38.2 34/161  
:HMM:PFM   947->982 PF03193 * DUF258 3.9e-05 31.4 35/161  
:BLT:SWISS 1->1201 PMD1_SCHPO e-168 37.5 %
:PROS 420->434|PS00211|ABC_TRANSPORTER_1
:PROS 1086->1100|PS00211|ABC_TRANSPORTER_1
:PROS 454->466|PS00398|RECOMBINASES_2
:TM
:REPEAT 2|235->521|920->1200
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00004 GT:GENE CIRG_00004 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 1201 SQ:AASEQ MSALFKQRVSFVDKLPVGRPTTTITTSANLIQAGIGDKLSILVQSLTLVVAASALVFIMVVFSITVPIFLGLQKKVDFADEKASSVAAEALGTMRTIVACGAEARLGARYAEWIAEARKRGLRIPPVMGVHISPANFAMYCNFALTFWFGVRQYSRGNVDDIGQVVIPRSYHNVPSSASAYKTKRVIFSVLVVVSAISMIASPMIAISKAISASTAFFEVLDAPSPNTSGLKEPEISASRDIKFHEAVFSYPSRPNVKVLNKLSLCLPAGKITALVGASGCGKSTIVALLERWYQLDDDLEPFKKSCDEEDSDPEDKKANSDAVTPNGGTITLGDTNIVDVHLKWWRSRIGLVQQEPFCFNTSIYQNVSYGLVGSEWEGADETTKRRLVKEACIEAFADEFINKLPEGYDTLVGENGMKLSGGQRQRLAIARSIIKKPSILILDEATSSIDVRGERIVQEALDRVSKNRTTITIAHRLSTIKKADKIILLKGGQAMEEGTHEELLAQGGLYHALVKNQQLEMDDSPSSPLPVIEDVLEQSVSNTRTSEKQTDDSHGLEVSEEVYKPRSLIRSVGLFLWEQGRLWWLYASVIIGAVGCGAAFSVQSFIFAHLVETFQLTEAAALRDRANFWALMFFILAIGVFCFYFLLGFSSASVSTRSLQHIATTYRQEYFESIIRKPIPFFDKEENSAGALTGRLSSDPSQLQELLGPYMAFPLISLFNIFGCIAISFAFGWKLTLVSVFSAFPLIILAMFVRVRYELRFERLNAAVFAESSQFASEAIGAFRTVTSLTLEDSINQRYAALLRSHGCIFEGETWLFGICGLRQLGSGMYGIMFLVLVSSTSLAEAGCFRYGGQLVARGEYDVVQFFVVYIAIILGGQASGQFGSLTPNMAQASAAANRIISLRPSESEASSAPDARVEFEGGARIEFKSVSFKYPTRDVPVFRNLNLTVERGQFAAFVGPSGCGKTSIISILESIRSLSTLNRFYDYQAGSIYINGVELQTLEMKNYRSALSLVSQEPIMYQGAFDGLTETRSSIRDNVLLGVDRSTVTDEELYQTCRDAEIHDFIQSLPDGYATEVGNRGLSLSGGQKQRLSIARALMRRPHVLLLDEATSSLDSESEKQVQAAIERTAKGRTVLVVAHRLATVQNADVIFVFGEARGDGEKGDERKGTEIVEYGDHRSLIRKRGVYFEMCESQALDR BL:SWS:NREP 1 BL:SWS:REP 1->1201|PMD1_SCHPO|e-168|37.5|1100/1362| PROS 420->434|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 1086->1100|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 454->466|PS00398|RECOMBINASES_2|PDOC00334| TM:NTM 7 TM:REGION 41->63| TM:REGION 588->610| TM:REGION 631->653| TM:REGION 707->729| TM:REGION 734->755| TM:REGION 824->846| TM:REGION 861->883| NREPEAT 1 REPEAT 2|235->521|920->1200| SEG 195->216|saismiaspmiaiskaisasta| SEG 906->915|pseseassap| SEG 969->983|siisilesirslstl| BL:PDB:NREP 1 BL:PDB:REP 3->1198|3g60A|e-151|38.1|1019/1182| RP:PDB:NREP 4 RP:PDB:REP 72->171|2bnlB|2e-07|2.0|98/126| RP:PDB:REP 242->507|3b5jA|5e-51|40.7|226/243| RP:PDB:REP 761->895|2bnlB|4e-07|7.4|121/126| RP:PDB:REP 927->1184|3b5jA|1e-50|34.9|224/243| RP:PFM:NREP 6 RP:PFM:REP 4->150|PF00664|4e-10|26.4|147/274|ABC_membrane| RP:PFM:REP 326->448|PF00005|3e-13|43.4|106/123|ABC_tran| RP:PFM:REP 420->487|PF02463|4e-05|38.2|68/536|SMC_N| RP:PFM:REP 627->800|PF00664|1e-14|27.8|169/274|ABC_membrane| RP:PFM:REP 991->1114|PF00005|3e-10|33.6|108/123|ABC_tran| RP:PFM:REP 1086->1154|PF02463|8e-04|26.0|69/536|SMC_N| HM:PFM:NREP 7 HM:PFM:REP 3->168|PF00664|1.7e-20|31.3|166/275|ABC_membrane| HM:PFM:REP 592->880|PF00664|2.2e-34|25.5|263/275|ABC_membrane| HM:PFM:REP 324->448|PF00005|1.3e-18|28.6|105/118|ABC_tran| HM:PFM:REP 981->1114|PF00005|9.7e-20|27.0|111/118|ABC_tran| HM:PFM:REP 419->490|PF02463|4.9e-06|33.3|72/220|SMC_N| HM:PFM:REP 258->292|PF03193|3.8e-05|38.2|34/161|DUF258| HM:PFM:REP 947->982|PF03193|3.9e-05|31.4|35/161|DUF258| GO:PFM:NREP 18 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 5 RP:SCP:REP 4->166|2hydA2|4e-10|11.7|162/323|f.37.1.1| RP:SCP:REP 217->283|1esmA|8e-05|12.2|67/311|c.37.1.6| RP:SCP:REP 256->503|1e69A|9e-41|18.7|214/263|c.37.1.12| RP:SCP:REP 584->904|2hydA2|5e-28|15.8|304/323|f.37.1.1| RP:SCP:REP 927->1155|1e69A|7e-38|13.0|216/263|c.37.1.12| HM:SCP:REP 1->224|1pf4A2|3.9e-19|22.5|200/311|f.37.1.1|1/2|ABC transporter transmembrane region| HM:SCP:REP 242->503|1pf4A1|9.2e-56|37.2|223/244|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 561->942|1pf4A2|8.1e-43|22.2|311/311|f.37.1.1|2/2|ABC transporter transmembrane region| HM:SCP:REP 889->1194|1xmiA_|1.8e-52|29.7|256/0|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 23767 OP:NHOMOORG 1174 OP:PATTERN 55616615CBA9D9A5H5564547J78CC7F8A5658484875C9HEQ79bPM39BA5A67531A123 AAD5kIIGLLKDC9DBEBB-BG44JQBBBBBEGHHHPcWY6JBaOUNJPFCDVVOBES66LTKIWFPfanGMGFFVOMODmSB64557FGB91B57D--78DC94F9HAE223333211122223ECBJJFCLDIGDJJMO887S6QKMOJJHBFCCF9CBBCDJAKchgI7GBABAAE9A88A9D77PL7GHSbbdZdahiThjfddilcYYYZihpGJNbhSRYWXYWXsqNMMOOONMNNOOMNMJLJGInaLSceTHYMbWWGGkiQJJJOUPORUVZfYVXbZaYbZXWUZaWYWLNLKMMNNNMLLMdWWTRSXXYVTfcikklknollPoRSbaaJTSPrROWaXYTF6zzTGBDPIBBPOQRBLIH6BDAA9AB999F9egkGBHNNKSIQSORSRSOJOr-LMVNJQJRYxC6***uvtp***yrbR7A9OTlQMPSSPQFFFFFFFFHDHCDHAT44543444445746785576564457493678955IXWMPVZdZbYMOPPMUUQhUSSSJTWRhJPPG4AIIHQHHHFMGbKWkCLG9E8BH99B87A89C99HD7DHT6PHJIBGQBDD49F9CAHH9D8A89KOENB998A9999A84655555557B97988LIHBLAF6BCNCCDCB9DEBABDBCFJFDE1-79HB6322222TMYTFMGJMMOKNNMHI-LJHILJKJLMLMNJJIJJNPUSbeQTKHIEHHIHHHIHEIEHHVHGGJIHI74XXYXZZWTXXaY118557545BBEA74MIcGFEFGD9BBBCAAAGDEFEEBGADCLIMOPLQdWaRRULPFZTX5555575456LRQXOPPPOaYXUWBEB788799A888833CABB676623322423*2R8577A-546298677768D866667CIQ8BGPJKF5A6 6765TQH-XD87SWNHMPIMPURdSfPHHDFFFRTOFMNLOIHEEESORcWWhcKJTLNIIKGEB7892EA6DAFBC2CE8998GD69-UiDMTPQGFFMDBIQNI6G*n*UdSnYoLKKLNTHilKyH**d1nRzILJJbJO*YFLLKGVJE*JUNRcOf*NqQLRiQZ*ngzdBGEB*688GDkih*IswGI*mrvW ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ PSIPRED ccHHHccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEEcccccccccccccEEEEccccEEEEEccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEccEEHHHccHHHHHHHccEEccccHHccccHHHHHHccccccccccccccccHHHHHHHHHHcccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHcccEEEEEEccEEEEcccHHHHHHcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccccHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEccccccccccccEEEEccccEEEEEccccccHHHHHHHHHHHcccccccccccccccEEEEccEEHHHccHHHHHHHccEEccccEEEcccccccccccccHHHHHHcccccccccHHHHHHHHHHcccHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEHHHHHccHHHHHHHHHHHHHHHcccEEEEEEccHHHHHcccEEEEEccccccccccccccccEEEEcccHHHHHHcccHHHHHHHHHHccc 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