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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00311
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  221/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.51.1d.104.1d.68.5
:603 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   95->565 1h4sA PDBj 1e-92 41.3 %
:RPS:PDB   113->603 2du7A PDBj 4e-51 10.8 %
:RPS:SCOP  95->369 1h4qA2  d.104.1.1 * 5e-43 49.4 %
:RPS:SCOP  370->505 1h4qA1  c.51.1.1 * 4e-34 44.1 %
:RPS:SCOP  506->603 1nj1A2  d.68.5.1 * 6e-18 21.4 %
:HMM:SCOP  96->369 1nj8A3 d.104.1.1 * 3e-80 32.0 %
:HMM:SCOP  370->505 1hc7A1 c.51.1.1 * 1.7e-26 40.2 %
:HMM:SCOP  506->603 1hc7A3 d.68.5.1 * 1.2e-15 35.1 %
:RPS:PFM   135->259 PF00587 * tRNA-synt_2b 5e-06 24.2 %
:RPS:PFM   409->479 PF03129 * HGTP_anticodon 6e-08 46.3 %
:RPS:PFM   512->603 PF09180 * ProRS-C_1 1e-11 52.2 %
:HMM:PFM   131->294 PF00587 * tRNA-synt_2b 8.9e-25 25.5 157/173  
:HMM:PFM   512->603 PF09180 * ProRS-C_1 5.4e-23 42.6 68/68  
:HMM:PFM   382->484 PF03129 * HGTP_anticodon 5.1e-16 33.0 91/94  
:BLT:SWISS 83->603 YHY6_SCHPO 0.0 64.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00311 GT:GENE CIRG_00311 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 603 SQ:AASEQ MSSQQSQDGVDASPTSTSLPICTMDPTTQGGAAPAAGELSKNAAKKAAKQKKQAADKAEKAANKGIGKSESKSSNPKHPKKKIDGAALIGIDVAKEDDFAAWYQQVLLKGDMLDYYDVSGCFVLKPHSFFIWEEIQSWFNDKIKKMGVKNCSFPLFVSEDVLKKEKDHIEGFAAEVAWVTHAGSSELEKKIAIRPTSETVMYPYYAKWIRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHLTEAAAREEVLQILQHYAHVYEQLLAIPVIRGQKTDKEKFAGGLYTTTVEGYIPATGRGIQGGTSHGLGQNFSKMFGITVEDPTSKPDEKKPPLHVWQNSWGLSTRTIGVMVMVHSDNRGLVLPPRVADVQTVIVPVGLTAKTPDDVRASINAEIDHLASVLEAAGIRVEIDKREGYSPGWKFNDWELKGIPLRLEFGPGESSGGFVTTSRRDIPGKEGKSTIPIAELATAVPALLETIQADLYARADAEFRSHVKHITNWEDFCPALNDKNLCMIPHCLTEQCEDEIKEMSARKAEEETGEAVDAKLPSMGAKSLCIPFEQPAGIKKGVTKCTNPRCTRLAEQWCLFGRSY BL:SWS:NREP 1 BL:SWS:REP 83->603|YHY6_SCHPO|0.0|64.5|513/716| SEG 30->37|ggaapaag| SEG 41->64|knaakkaakqkkqaadkaekaank| SEG 68->82|kseskssnpkhpkkk| BL:PDB:NREP 1 BL:PDB:REP 95->565|1h4sA|1e-92|41.3|453/473| RP:PDB:NREP 1 RP:PDB:REP 113->603|2du7A|4e-51|10.8|426/539| RP:PFM:NREP 3 RP:PFM:REP 135->259|PF00587|5e-06|24.2|120/170|tRNA-synt_2b| RP:PFM:REP 409->479|PF03129|6e-08|46.3|67/91|HGTP_anticodon| RP:PFM:REP 512->603|PF09180|1e-11|52.2|69/69|ProRS-C_1| HM:PFM:NREP 3 HM:PFM:REP 131->294|PF00587|8.9e-25|25.5|157/173|tRNA-synt_2b| HM:PFM:REP 512->603|PF09180|5.4e-23|42.6|68/68|ProRS-C_1| HM:PFM:REP 382->484|PF03129|5.1e-16|33.0|91/94|HGTP_anticodon| GO:PFM:NREP 15 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| GO:PFM GO:0000166|"GO:nucleotide binding"|PF09180|IPR016061| GO:PFM GO:0004827|"GO:proline-tRNA ligase activity"|PF09180|IPR016061| GO:PFM GO:0005524|"GO:ATP binding"|PF09180|IPR016061| GO:PFM GO:0005737|"GO:cytoplasm"|PF09180|IPR016061| GO:PFM GO:0006412|"GO:translation"|PF09180|IPR016061| GO:PFM GO:0006433|"GO:prolyl-tRNA aminoacylation"|PF09180|IPR016061| RP:SCP:NREP 3 RP:SCP:REP 95->369|1h4qA2|5e-43|49.4|259/264|d.104.1.1| RP:SCP:REP 370->505|1h4qA1|4e-34|44.1|127/127|c.51.1.1| RP:SCP:REP 506->603|1nj1A2|6e-18|21.4|70/71|d.68.5.1| HM:SCP:REP 96->369|1nj8A3|3e-80|32.0|266/268|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 370->505|1hc7A1|1.7e-26|40.2|127/127|c.51.1.1|1/1|Class II aaRS ABD-related| HM:SCP:REP 506->603|1hc7A3|1.2e-15|35.1|74/74|d.68.5.1|1/1|C-terminal domain of ProRS| OP:NHOMO 571 OP:NHOMOORG 483 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111111 --1-1-----------------11--------------1--1111-1-11-----1-1--11---1-111-1111111----1-----1111111111111111111111--------------11111111111111111----1--------------1----------------------1111111-1--111-11111111111----1-111---11--------11--------------------------------------------------------------------------------------------1--1111111-1-11111---1---1111-----1---1--11-----1-1--------------------------------------------------------------------------------------1--------------------------------11-1-1111-1111111----1111------1111111-111111-11-111-111-----1----------111-11111--1----------------11-111---------------------------------------------------------------1---------------------------------------------------------------------------------------------------------1------------------------------1-11-------------------------------------------------------11----11111111--111111-1111111111111111111----------1-1 1111111-421111-11111111212211111111111111111111111112111111111111111111111111-1111111111-1211111111111112111222211112111111112111181-1121111111121111111121121123621111211512212222I2223222441422221112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 506 STR:RPRED 83.9 SQ:SECSTR #######################################################################################ccEEEEEccccccccccHHcEEHHHccccccTTcccccccccccccccccccccccccccccccccccccccccccccccccccccccccTTccccccccEEEEEcccTTHHHHHHHHHHTTTTTccccEEEEEEEEEccccccccccccccccEEEEEEEEEcTTccHHHHHHHHHHHHHHHHHGGGTccccccEEcTTccTTccTTTcEEEEEccccccccEEEEEEEEccHHHHHHTTccccEEEcccTcccEEcEEEEEEEEEcHHHHHHHHHTTccccHHHHccccccccccHHHHcEEHTTcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEccccccTTccccccccccccEGEETTEEccHHHHcccccccccTTccccccccccccEEccccHHHHHHHHHHHHHHHHHTTTccccccccccccHHHHHHHHTTcTTcEEcccccccccccccHHH#######HH##HHTTTTcccc#cccccc PSIPRED ccccccccccccccccccHHHHHHcccccHHHHHHHccHHccccHHHHHHHHHcccccccccHHHcccccccccccccccccHHccEEEEcccccHHHHHHHHHHHHHHcccccccccccEEEEcccHHHHHHHHHHHHHHHHHHcccEEEccccEEcHHHHHHHccccccccccEEEEEccccccccccEEEcccccHHHHHHHHHHcccHHHccEEEEEEEEEEcccccccccccEEEEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccHHHHHccccEEEEEEcccccEEEEEEEEcccccccHHcccEEEccccccccEEEEEEEEcccHHHHHHHHHHHHHHHccccccEEccccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHccccEEEEEcccHHHccEEEEEEccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccccccEEEccccccccEEEEEEEEcc //