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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00313
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  124/199 : Viruses  0/175   --->[See Alignment]
b.68.7b.69.10b.69.4
:719 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   298->478 1erjC PDBj 9e-09 32.5 %
:RPS:PDB   226->682 3ei3A PDBj 2e-20 9.6 %
:RPS:SCOP  247->364 1k8kC  b.69.4.1 * 2e-17 15.2 %
:RPS:SCOP  335->458 1k32A2  b.68.7.1 * 4e-04 9.8 %
:RPS:SCOP  440->509 1jofA  b.69.10.1 * 4e-04 10.0 %
:RPS:SCOP  653->682 1pguA2  b.69.4.1 * 2e-04 23.3 %
:HMM:SCOP  229->683 1p22A2 b.69.4.1 * 2.2e-36 27.1 %
:RPS:PFM   53->110 PF06933 * SSP160 7e-04 36.8 %
:HMM:PFM   284->314 PF00400 * WD40 2.7e-05 29.0 31/39  
:HMM:PFM   325->362 PF00400 * WD40 7e-10 44.4 36/39  
:HMM:PFM   427->456 PF00400 * WD40 0.0009 25.9 27/39  
:HMM:PFM   488->510 PF00400 * WD40 0.00033 39.1 23/39  
:HMM:PFM   653->682 PF00400 * WD40 0.00011 30.0 30/39  
:HMM:PFM   47->110 PF06933 * SSP160 0.00098 36.5 63/756  
:BLT:SWISS 190->682 CDT2_SCHPO 9e-36 35.8 %
:PROS 349->363|PS00678|WD_REPEATS_1
:PROS 443->457|PS00678|WD_REPEATS_1
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00313 GT:GENE CIRG_00313 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 719 SQ:AASEQ MSNALRDKQPSKLNECLDTIPSSPPTLNASLDTLPASPPSLKPKKRPPVTPRSFKRFFTPRSSLHGSSTRSGVRAARNNLKDILTPPSSLNRNGPAFLNLQNDSKSISRQLPDQPSTPSRKRKLSFCTSSPPLQSSPLRRVRTVPAIYTDPIDRKEDIEEATSTFNTIIEEPNEEKIPEPIPLHRSQAIQAASPALLRNLAISRSSRVTLRSPSYGTVWQDETANFYSRPEGLHRCWQDDHPTLPFCTAACHTNSLVAVGDEEGGIRILDTAKGDKAGFSQSFLTFQPHMNSIMDLEFSSDDKLLATASGDQSSHIIDMPTQTAVYCLSKHSSSVKRVQFQPGSNGNVVATCSRDGSINIWDLRYKAFDKPSLQLHCSLASDGDDTTRISTAKMKYPQVSNNIRGAHSERPRSKGQSESQSHREDISVTSISFLHPGREHLFVTSCESNACVRLWDMRTSYSLRRKMSTPVAITRQPESHSRYRQFGLTSLVFNGDGNRLYTLCRDGTVYAYSTPHLILGNSNELSLSNPPLRRFPGEEAKAGLGPLYGFRHPRLLVATFFVKIALRQAQNDNTELLAVGSSDNCAIVFPTNERYFKKSLPTPEISLPTNSTPGSKGFGGRRIGLQRTNSGTSLSARLEHDIPIYQHGSPLVEGHQKEVSAVSWTNNGELVTVSDDLHARCWREGPDARDLRLGGEAGGRRWNCGWAEVNDPEYDEEEC BL:SWS:NREP 1 BL:SWS:REP 190->682|CDT2_SCHPO|9e-36|35.8|372/490| PROS 349->363|PS00678|WD_REPEATS_1|PDOC00574| PROS 443->457|PS00678|WD_REPEATS_1|PDOC00574| SEG 34->48|lpasppslkpkkrpp| SEG 129->138|sspplqsspl| SEG 168->182|iieepneekipepip| BL:PDB:NREP 1 BL:PDB:REP 298->478|1erjC|9e-09|32.5|166/357| RP:PDB:NREP 1 RP:PDB:REP 226->682|3ei3A|2e-20|9.6|415/1105| RP:PFM:NREP 1 RP:PFM:REP 53->110|PF06933|7e-04|36.8|57/748|SSP160| HM:PFM:NREP 6 HM:PFM:REP 284->314|PF00400|2.7e-05|29.0|31/39|WD40| HM:PFM:REP 325->362|PF00400|7e-10|44.4|36/39|WD40| HM:PFM:REP 427->456|PF00400|0.0009|25.9|27/39|WD40| HM:PFM:REP 488->510|PF00400|0.00033|39.1|23/39|WD40| HM:PFM:REP 653->682|PF00400|0.00011|30.0|30/39|WD40| HM:PFM:REP 47->110|PF06933|0.00098|36.5|63/756|SSP160| RP:SCP:NREP 4 RP:SCP:REP 247->364|1k8kC|2e-17|15.2|112/354|b.69.4.1| RP:SCP:REP 335->458|1k32A2|4e-04|9.8|122/281|b.68.7.1| RP:SCP:REP 440->509|1jofA|4e-04|10.0|60/365|b.69.10.1| RP:SCP:REP 653->682|1pguA2|2e-04|23.3|30/281|b.69.4.1| HM:SCP:REP 229->683|1p22A2|2.2e-36|27.1|292/0|b.69.4.1|1/1|WD40 repeat-like| OP:NHOMO 208 OP:NHOMOORG 135 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------11---------------------------------------------------------------------1-----211--1---------------124---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----1-------111111121211222111111111211111111139231121111611111-----------------------11--121124-111-11111---1--11-13-1-1-1-22-312A2-322---11-212-111-1-11-31121----11-11--1121-2112--11-1--131---1342- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 517 STR:RPRED 71.9 SQ:SECSTR ##############################################################################################################################################################################################cGGGccccccTTGGGccccccccEEEEETTEEEEEEEcccccEEEEEccTTcccccEEEEcccEEEEEETTEEEEEEEETTEEEcEccccEEEEEEccccEEEEEcccccccEEEEEETTTTEEEEEETTTccEEEEEEccccccEEEEEEEEETEEEEEEEETTcEEEEEEEcTTcEEEEEEccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEcccccTTEEEEEccccEEEEEEcccccEEEEEEEcccEEEEEEEEGGGTEEEEEEEEEEEEcccccEEEccccHHHEEEEcccccccccEEEEEEEEEEETTcccEEEEEcccccTTEEEEETccEEEEEEccTTEEEEEEEEEccEcccEEEEEEETTccccEEEEEEEEccTTccccccEEEEETTTccEEEETTEEEEEEEEEEcccEEEEEEETTEEEEEETTEEEEEEEcTTEEEEEcccccEEEEEEETTEEEEEccccEEEEcccccEEEEEEEcccEEEEEEEccc############ DISOP:02AL 719-720| PSIPRED ccccccccccHHHHcccccccccccccccccccccccccccccccccccccHHEEEEEcccccccccccccHHHccccccHHHcccccccccccccHHHHcccccccccccccccccccccEEEccccccccccccccccEEEEcccccccccccccccccccEEEEEEEccccEEcccccccEEEEEEEcccccEEEEEEEcccccEEEEcccccEEEcccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccccccccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEccccccEEEEEEcccccccEEEEEEccccEEEEEcccccEEEcccccEEEEEEccccEEEEEEcccccEEEEcccEEEEEcccccccEEEEEEEcccccEEEEEEccccccEEEEEEEccccEEEEEEcccccEEEEccccccEEEEEcccccccccccEEEEEEcccccEEEEEEcccEEEEEEccccEEccccEEEEcccccEEEEccccccEEEEEccccccEEEEEEEcccEEEEEEEcccccEEEEEEcccEEEEEEccccEEEEEEccccEEEccccccccccccccEEEEEEccccEEEEEEccccEEEEEccccEEEcccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEEEEcccEEEEEEEccccccccEEccc //