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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00331
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  179/915 : Eukaryota  86/199 : Viruses  0/175   --->[See Alignment]
c.6.2
:411 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   203->399 2c1gA PDBj 2e-16 31.5 %
:RPS:PDB   205->405 2cc0B PDBj 2e-25 22.2 %
:RPS:SCOP  204->397 1ny1A  c.6.2.3 * 1e-26 19.4 %
:HMM:SCOP  193->409 2iw0A1 c.6.2.3 * 2.3e-42 29.9 %
:RPS:PFM   209->322 PF01522 * Polysacc_deac_1 2e-12 33.9 %
:HMM:PFM   203->323 PF01522 * Polysacc_deac_1 9.1e-24 31.9 116/124  
:BLT:SWISS 201->398 CDA_MUCRO 7e-14 26.3 %
:TM

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00331 GT:GENE CIRG_00331 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 411 SQ:AASEQ MAPECLVAVYRAVTLCLALLNISIFAAPMRPFVEPLVIDTFDVPGSNNLGGWAGPDEGMPAEYGPGYLHLTPSDPDMNFHTRLGPYCLDMSEYMNMYLHISFSGTDKFTVSLTQNNEWCDQTRAPYPETWDSLEAARYSAGGDIYMPLHHFNIDFSRVNSVAFNGFYTREPAILYKVEITSDVPEDFEVPVKLPSGTLAVKCKRPNSFAFGIDDGRPEFAQEVIQILEEEHIKVTFFTVGNGLLDQTSNFTETYRDMLSRGHQVALHTFSHPAVEGLSSLEEIDSEITENIKVMKEQLGIESRYFRPPFGVVGARTRQRLAEHIENPYIITWSVDIEDWLWAHSPTPEKQYEAFKRDLEKGGDLAVMHFLHRSTVDYFKDVFQLVKASGKQIMRVDQCMEDPDAPPLKDSS BL:SWS:NREP 1 BL:SWS:REP 201->398|CDA_MUCRO|7e-14|26.3|190/421| TM:NTM 1 TM:REGION 5->27| BL:PDB:NREP 1 BL:PDB:REP 203->399|2c1gA|2e-16|31.5|181/384| RP:PDB:NREP 1 RP:PDB:REP 205->405|2cc0B|2e-25|22.2|189/192| RP:PFM:NREP 1 RP:PFM:REP 209->322|PF01522|2e-12|33.9|109/123|Polysacc_deac_1| HM:PFM:NREP 1 HM:PFM:REP 203->323|PF01522|9.1e-24|31.9|116/124|Polysacc_deac_1| GO:PFM:NREP 2 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01522|IPR002509| GO:PFM GO:0016810|"GO:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"|PF01522|IPR002509| RP:SCP:NREP 1 RP:SCP:REP 204->397|1ny1A|1e-26|19.4|186/235|c.6.2.3| HM:SCP:REP 193->409|2iw0A1|2.3e-42|29.9|211/0|c.6.2.3|1/1|Glycoside hydrolase/deacetylase| OP:NHOMO 555 OP:NHOMOORG 265 OP:PATTERN -------------------------------------------------------------------- 111-21--------111-----111------1-------------1------1----------1---2311-111----21---------11--11-----121--11---------------------------------11----1--11---------------1-11--------------------2-21111122121113212322611122--42-111111235--------------------1-1--------------------1-111111--1--11111111111111111111111111----1111-33--11111112-22211-1-1312--31---11222-3112223------------------11111111111-----------------1----------11------12----1---------------------1------------------------------------------------------------------------------------------------------------1-------1--111---------------1----------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- ------------JG3-17642233422222222434222222221144236555667343441-1--111111-11111111--11---4341A732123482JAL---------------------------------------------------------------------------------1-6--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 254 STR:RPRED 61.8 SQ:SECSTR ##############################################################################################################################################HHHHHccccccc#########ccccTTccccccc#GGGccTTccccccccccTTcccccTcccEEEEEEEEccccTTHHHHHHHHHHTTcccEEEEcHHGccHHHHHcHHHHHHHHHTTcEEEEcccccccGGGccHHHHHHHHHHHHHHHHHHTTcccccEEccGGGcccHHHHHHHHHTTcTcEEccccEEccGGGTcHHGTccHHHHHHHHHTccTTcEEEEEcccHHHHHHHHHHHHHHHHTTEEEcEEcTTTccEEccT##### DISOP:02AL 12-32,411-412| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccEEEEcccEEEEEEccccccccccccccEEcccccccEEEEEEEccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccEEEEEEEcccccccccEEEccEEccccHHHHHHHcccccccccccccccccccEEcccccccEEEEEEcccccHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEcccccccHHHHHHHHHHccccEEEEEEcccccccccccccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEHHHHccccccccccccc //