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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00335
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  46/68 : Bacteria  825/915 : Eukaryota  198/199 : Viruses  1/175   --->[See Alignment]
c.37.1
:593 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   117->537 2i4iA PDBj 1e-86 44.3 %
:RPS:PDB   113->503 3bxzB PDBj 1e-57 11.8 %
:RPS:SCOP  141->506 1pjrA1  c.37.1.19 * 4e-44 12.1 %
:HMM:SCOP  109->361 1wrbA1 c.37.1.19 * 6.2e-62 40.3 %
:HMM:SCOP  292->511 2fwrA1 c.37.1.19 * 1.7e-40 31.0 %
:RPS:PFM   153->319 PF00270 * DEAD 2e-27 40.7 %
:RPS:PFM   419->492 PF00271 * Helicase_C 2e-12 45.7 %
:HMM:PFM   153->343 PF00270 * DEAD 5.1e-46 40.2 164/167  
:HMM:PFM   414->494 PF00271 * Helicase_C 2.6e-23 39.0 77/78  
:BLT:SWISS 77->536 DED1_PHANO e-104 45.1 %
:PROS 299->307|PS00039|DEAD_ATP_HELICASE
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00335 GT:GENE CIRG_00335 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 593 SQ:AASEQ MAATESGSPRMEAKGMPDAPKFNGNMNSEAAALAREKGWAEPQHYNYATYNASPLTGGATSGEYEAPTWASTAAKYEWKDEYGDVGPRNEELEQMLFRDEYTNRAGNLFENLREIKVTAETTHQPNPIKSFDDAGLHPVLLENVKLCGYEVPTPVQAYSIPAVMNGYDLIAVAQTGSGKTAAFLIPVLSKLMGKAKKLAAARPDLTNGFNESVDSVRAEPLVLIVAPTRELATQIFDEARRLCYRSMLRPCVIYGGAPAREQRIDLHKGCDILIGTPGRILDFMGRNSLLSLHRVKYTIIDEADEMLHSNWEREFTQIMSGGDVNEDADHCYMMFSATFNKECRQVARRFLSIDHVRIRIGRAGSSHLNVTQQVIYTEDDKKKKALYDLILSIPPSRTLVFVNNKQQADLLDDFLFNNGLPSTSIHSDRTQREREDAIRAFRTGVCPIMVATGISARGLDIRHVMHVINFDLPSVEHGGIDEYIHRIGRTARIGNEGLATSFYNDGRDSAIATDLVKVLLECKQQIPDFLETYVPENGEVEWNDDTDGEDDDLDVAATDAAWGGENDGWDAPAAPAPVSKTDDWNAGNTGAAW BL:SWS:NREP 1 BL:SWS:REP 77->536|DED1_PHANO|e-104|45.1|448/696| PROS 299->307|PS00039|DEAD_ATP_HELICASE|PDOC00039| SEG 188->201|lsklmgkakklaaa| SEG 409->418|dllddflfnn| SEG 544->561|ddtdgedddldvaatdaa| BL:PDB:NREP 1 BL:PDB:REP 117->537|2i4iA|1e-86|44.3|404/408| RP:PDB:NREP 1 RP:PDB:REP 113->503|3bxzB|1e-57|11.8|365/440| RP:PFM:NREP 2 RP:PFM:REP 153->319|PF00270|2e-27|40.7|145/167|DEAD| RP:PFM:REP 419->492|PF00271|2e-12|45.7|70/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 153->343|PF00270|5.1e-46|40.2|164/167|DEAD| HM:PFM:REP 414->494|PF00271|2.6e-23|39.0|77/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 1 RP:SCP:REP 141->506|1pjrA1|4e-44|12.1|314/315|c.37.1.19| HM:SCP:REP 109->361|1wrbA1|6.2e-62|40.3|238/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 292->511|2fwrA1|1.7e-40|31.0|200/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 9810 OP:NHOMOORG 1070 OP:PATTERN ---2-22211111121-2112--2--------1111111111111121-2112----1111211--11 111-333333332332322-23113322222233333555-32333432444333323--4432333564211111111131-11111444413221--51553268715--------------222122222212111111111121-1111----12122111-2222111111111111131111--1124555555554555555434444555222325444444454222222222222222222223333223333333332233333222233333333333333333323333333333333333333333333-523655555555553422433334-1-121113334-1111------113-3323322212333333223333333333333333-3333333323223333333333333323333233333324444444435553323------------111111111111111111333324444355555554444445544443455544452344454544555554553343353222222222244573625253214333-444534544333364424--1-------1111111115111522997646B6899ACCCCCCCCCCCBCCBCBB1-2222311111154555555555555555-55555555555555555555555544555555555555454455554555541544556644556114511111333325448323333233333333222222222256666666666666666663222222225AAAA999998BBAA44555555553333232-332222--------11322212---1--12---11121-11111111------33 NLKKUSP5*POJOOSNNNLMONNOOONMMMMMMLLLLOLMKMLOMMMOLMOPMPKLNNNQPQNMNMMNEMOLMNNOOJPQMNKLMLKM-MVONNORQMNMPLOZbaAS*Q*hthmhtUQRNUcSsnN*Q**l3ui*PVVPlRZgTNaVTQcQHtUhWTYZ*ufYVTRhYd*giePHZVd*cbXOXvj**OysTVaVWXX --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 459 STR:RPRED 77.4 SQ:SECSTR ##############################################################################cccccTTcccccHHHHHHHHTcccccccTTGGGGHHHTHHHHHHHHHHTTccGGGcHHHHHHHHHHHHHHHTcccccHHHHHHHHHTTTTEEEEccTTccHHHHTHHHHHHHHHcccccEEEEcccHHHHHHHHHHHTTccccEEEEEccHHHHHHHHHTTHHHHHHTTccEEEccTTccHHHHHHHHHccEEEEEHHHHHHHHHHHHTcccGGGcccccccEEEEETHHHHHTTcccccEEccEEccTTTGGGcEEEccccTTccHHHHHccccEEEEcccccccccEEcccEEEccHHHHHHHHHHHHHHHHHHTccEEEEcccHHHHHHHHHHHHHTcccccEEccccHHHHHHHHTTTTccccEEEEcTTccTTccccTTccTHHHHTTcccccTTTTTHHHHHHHTccGGGcccEEEEEEccTTHHHHHHHHHHHTTcccEEccGGGHHHHHHc######################################################## DISOP:02AL 593-594| PSIPRED cccHHccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHHHHHHcccEEEEccccccccccHHHccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHccccEEEEccHHHHHHHHccccccccccEEEEEEccHHHHccccHHHHHHHHHHcccccccccEEEEEEccccHHHHHHHHHHcccccEEEEEccccccccccEEEEEEEcHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHcccccEEEEcHHHHcccccccccEEEEccccccccccccccccccccccccccccEEEEEEcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //