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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00336
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  16/915 : Eukaryota  69/199 : Viruses  0/175   --->[See Alignment]
b.1.18b.69.1c.97.1g.3.1
:648 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   71->114 9wgaA PDBj 2e-07 48.8 %
:BLT:PDB   142->647 1t2xA PDBj 5e-17 27.0 %
:RPS:PDB   71->108 2dkvA PDBj 3e-08 48.6 %
:RPS:SCOP  71->108 1ehdA1  g.3.1.1 * 3e-11 40.0 %
:RPS:SCOP  187->247 1wwrA1  c.97.1.2 * 7e-04 19.7 %
:RPS:SCOP  249->540 1gofA3  b.69.1.1 * 1e-08 20.4 %
:RPS:SCOP  584->647 1gofA1  b.1.18.2 * 7e-06 26.7 %
:HMM:SCOP  69->123 9wgaA1 g.3.1.1 * 4.2e-08 42.3 %
:HMM:SCOP  168->542 1k3iA3 b.69.1.1 * 4.8e-21 22.5 %
:HMM:SCOP  541->649 1k3iA1 b.1.18.2 * 1.2e-22 34.7 %
:RPS:PFM   68->108 PF00187 * Chitin_bind_1 3e-07 47.4 %
:RPS:PFM   175->392 PF07250 * Glyoxal_oxid_N 6e-38 49.2 %
:RPS:PFM   550->647 PF09118 * DUF1929 7e-09 30.6 %
:HMM:PFM   171->392 PF07250 * Glyoxal_oxid_N 2.7e-43 36.0 197/243  
:HMM:PFM   546->647 PF09118 * DUF1929 1.7e-25 28.9 97/97  
:HMM:PFM   70->111 PF00187 * Chitin_bind_1 4.9e-08 50.0 38/40  
:BLT:SWISS 71->108 CHIX_PEA 2e-07 60.0 %
:BLT:SWISS 85->121 CHI4_PHAVU 1e-05 48.6 %
:BLT:SWISS 142->647 GAOA_GIBZE 2e-16 26.8 %

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00336 GT:GENE CIRG_00336 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 648 SQ:AASEQ MFAGFREKIQQGLASPHEICMELINSTDPIFEDMFPSNEQPVDEPLLRPAPPKTPAGDSDGSTLVTNNGHCGSAHKNMVCGDWPKGSCCSPFGICGNTTSHCGYGCQSGACLSEDALKPPALIRFRHSRLPGQFHIIGRSGVPPMIAVLLQNGRVAFADKVENYTEVVLENGRYAYSTEFDPITSSLAPLSYKTNVFCSGGTFLADGRVLSVGGNGPLKWMDPTVDDGFRGIRYLERRFDDDNFDGTPWEEPGHQLSTGRWYPTVQTLSDGRVFVVSGSLNGDDPSVMRNNNPTYELLDKNGFPSGNSVELSILDENQPYYMYPFLHLLNDGTVFIFVSRSAEVFDVDAGVTVKTLPDLPGDYRTYPNTGGSVLLPLRSANGWEPEIIICGGGAFQDIDSPSDPTCGRIRPLSEEPRWELEAMPGGRIMGEGILLPDGTVIWINGCRNGAQGYGIAENPIYNPWIYRPQAPPKKRWAIGGTSEVPRMYHSVALLLLDGTVLVAGSNPVEQPLLVTNPNDPMLAFPTEFRVEIYTPHYFMDGKADRRPRKIVISSRYLEPDGNFDITFHNRRPARKLSIVLYHGGFVTHSVHMGHRMLYLDHQGWKSWRKKQKVSVKMPPTSSVVPPGPYVIYVLVDGIPGEGQFVMVA BL:SWS:NREP 3 BL:SWS:REP 71->108|CHIX_PEA|2e-07|60.0|35/320| BL:SWS:REP 85->121|CHI4_PHAVU|1e-05|48.6|35/270| BL:SWS:REP 142->647|GAOA_GIBZE|2e-16|26.8|448/680| BL:PDB:NREP 2 BL:PDB:REP 71->114|9wgaA|2e-07|48.8|41/170| BL:PDB:REP 142->647|1t2xA|5e-17|27.0|452/639| RP:PDB:NREP 1 RP:PDB:REP 71->108|2dkvA|3e-08|48.6|35/286| RP:PFM:NREP 3 RP:PFM:REP 68->108|PF00187|3e-07|47.4|38/40|Chitin_bind_1| RP:PFM:REP 175->392|PF07250|6e-38|49.2|197/214|Glyoxal_oxid_N| RP:PFM:REP 550->647|PF09118|7e-09|30.6|98/101|DUF1929| HM:PFM:NREP 3 HM:PFM:REP 171->392|PF07250|2.7e-43|36.0|197/243|Glyoxal_oxid_N| HM:PFM:REP 546->647|PF09118|1.7e-25|28.9|97/97|DUF1929| HM:PFM:REP 70->111|PF00187|4.9e-08|50.0|38/40|Chitin_bind_1| GO:PFM:NREP 1 GO:PFM GO:0008061|"GO:chitin binding"|PF00187|IPR001002| RP:SCP:NREP 4 RP:SCP:REP 71->108|1ehdA1|3e-11|40.0|35/45|g.3.1.1| RP:SCP:REP 187->247|1wwrA1|7e-04|19.7|61/151|c.97.1.2| RP:SCP:REP 249->540|1gofA3|1e-08|20.4|265/387|b.69.1.1| RP:SCP:REP 584->647|1gofA1|7e-06|26.7|60/102|b.1.18.2| HM:SCP:REP 69->123|9wgaA1|4.2e-08|42.3|52/0|g.3.1.1|1/1|Plant lectins/antimicrobial peptides| HM:SCP:REP 168->542|1k3iA3|4.8e-21|22.5|311/0|b.69.1.1|1/1|Galactose oxidase, central domain| HM:SCP:REP 541->649|1k3iA1|1.2e-22|34.7|101/0|b.1.18.2|1/1|E set domains| OP:NHOMO 256 OP:NHOMOORG 85 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------1-1-----------------------111------------------------------------------------------------------------------------------------1--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------221-2----1----------------------------------------------------------------------1--------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------- ------------3331-33----1-1-11111122222222221114311123212511111---------------------------735-62B3332343212----------------------------------------------------------------------GC-----1-Y47A475------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 507 STR:RPRED 78.2 SQ:SECSTR ###########################################################ccGGGccTTccccTTTTTccc###GGGcEEcTTccEEccHHHHcTTcccccGccc###########################cccEEEEETTTTEEEEEccccc#cccTTcccccEEEEEEcTTTccEEEEEEcccccccEEEEcTTcEEEEEccccTTc#################EEEEETTTTE##EE#EcccccccccccEEEEcTTccEEEEcccccc###ccccccEEEEETTTTEEEEETTccGGGccccTTTHHHcccEEEcGGGcEEEcccccEEEEEEccTTEEEEEEEcEETTEEcccccTcEEEEEETTTTEEGEEEEEcccccccEEccccEEEEEcccTTcccEEcTTcccccccccEEEEcTTccEEEEccccEEcTTcc##cccccccEEEETT###TTEEEEcccccccccTTEEEEEcTTccEEEEEcccccc##cccc##########ccEEEEEEcGGGTTccccccccEEEEcccEEETTcE##EEEEEcccccEEEEEEc##cEEETTccccccEcccEEccccEE######EEEccccTTTcccEEEEEEEEcTccccccEEEEE# DISOP:02AL 648-649| PSIPRED cccHHHHHHHHHHccHHHHHHHHHccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccEEEccccccccEEEEEEEcccEEEEEEccccccccccccccEEEEEEEEcccccEEEccccccEEcccccccccccEEEEcccccccccccccccccccEEEEEcccccccccccEEEccccHHcccccccEEEEcccccEEEEEEcccccccEEccccccEEEEcccccccccccccccccccccccccccEEEEEcccEEEEEEccccEEEEcccccEEEEcccccccccccHHHccEEEEEccccccccccEEEEEccccccccccccccEEEEEccccccEEEcccccccccccEEEEcccccEEEEccccccccccccccccEEEEEEEcccccccccEEEcccccccccHHEEEEEccccEEEEEcccccccccccccccccccccccEEEEEEEccccccccccccccEEEEEccccEEcccEEEEEEEccccccEEEEEEEEccccEEEEccccEEEEccccEEEEccccEEEEEEEcccccccccccEEEEEEEccccccEEEEEEc //