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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00340
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  25/915 : Eukaryota  19/199 : Viruses  0/175   --->[See Alignment]
b.68.8
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   111->294 1iubA PDBj 8e-06 26.4 %
:RPS:SCOP  112->312 1iubA  b.68.8.1 * 8e-05 24.0 %
:HMM:SCOP  8->248 1ofzA_ b.68.8.1 * 1.8e-44 36.3 %
:HMM:SCOP  250->354 1ofzA_ b.68.8.1 * 2.1e-22 42.3 %
:RPS:PFM   27->69 PF03984 * DUF346 3e-04 52.4 %
:HMM:PFM   31->69 PF03984 * DUF346 4e-09 33.3 36/40  
:HMM:PFM   128->165 PF03984 * DUF346 3.7e-06 29.4 34/40  
:HMM:PFM   177->216 PF03984 * DUF346 5.5e-08 44.4 36/40  
:HMM:PFM   226->262 PF03984 * DUF346 4.8e-07 41.2 34/40  
:HMM:PFM   275->310 PF03984 * DUF346 9e-07 33.3 33/40  
:HMM:PFM   86->103 PF10708 * DUF2510 3.5e-05 33.3 18/36  
:BLT:SWISS 111->294 LECF_ALEAU 2e-05 26.4 %
:REPEAT 8|9->40|41->88|89->137|138->186|187->235|236->284|285->329|330->355

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00340 GT:GENE CIRG_00340 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 355 SQ:AASEQ MRVAATTPQALELLHSIAATAISWSSGRLDVFGLGTNNALYHKWYQRQWGPSQNDWEYLGGTFSSQPTAVSWGDDRIDIFGLGTNNQMYHKYWDGSAWGPSTTGYENLGGVFSSRPSAVSWAENRLDIFGLGTNNQMYHKWWNGARWGPSQTDWENLGGVFSSPPSAVSWGPNRIDIFGLGTDNRMYHKWWDGSRWGPSQTGWENLGGVFNSQPVAVAWSANRLDIFGVGTDNALYHKWWDGSRWGPSTTGWENLGGVLTSPPAVVSWEANRLDIFGIGTDNQMYHKWWDGSRWNDWEALGGVFNSAPAAVSWGPRRLDIFGLGTNNAMFHKWFDGRWGPSTTGWESLGGTFTSS BL:SWS:NREP 1 BL:SWS:REP 111->294|LECF_ALEAU|2e-05|26.4|174/313| NREPEAT 1 REPEAT 8|9->40|41->88|89->137|138->186|187->235|236->284|285->329|330->355| BL:PDB:NREP 1 BL:PDB:REP 111->294|1iubA|8e-06|26.4|174/312| RP:PFM:NREP 1 RP:PFM:REP 27->69|PF03984|3e-04|52.4|42/42|DUF346| HM:PFM:NREP 6 HM:PFM:REP 31->69|PF03984|4e-09|33.3|36/40|DUF346| HM:PFM:REP 128->165|PF03984|3.7e-06|29.4|34/40|DUF346| HM:PFM:REP 177->216|PF03984|5.5e-08|44.4|36/40|DUF346| HM:PFM:REP 226->262|PF03984|4.8e-07|41.2|34/40|DUF346| HM:PFM:REP 275->310|PF03984|9e-07|33.3|33/40|DUF346| HM:PFM:REP 86->103|PF10708|3.5e-05|33.3|18/36|DUF2510| RP:SCP:NREP 1 RP:SCP:REP 112->312|1iubA|8e-05|24.0|192/312|b.68.8.1| HM:SCP:REP 8->248|1ofzA_|1.8e-44|36.3|226/0|b.68.8.1|1/2|Fucose-specific lectin| HM:SCP:REP 250->354|1ofzA_|2.1e-22|42.3|104/0|b.68.8.1|2/2|Fucose-specific lectin| OP:NHOMO 64 OP:NHOMOORG 46 OP:PATTERN --------------------------------------------1------1---------------- ----------------------------------------------------------------1--11----------------------------------------------------------------------11---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------112222222-2----------1---1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------2---------------------------11-1----------------------------------------------------------------------------------------------------------------35------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -------------------------1-------111111111111--1----22--21----------------------------------------------------1---------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 175 STR:RPRED 49.3 SQ:SECSTR ##############################################################################################################cTTccEEEEEEccTT######ccEEEEEEEcTTcEEETTcccEEccGGGEEEcccEEEEEEETTEEEEEEcTTccEEEEEEccccEEEccGGGGTccccTTcccEEEEEcccEEEEEcccTTccEEEEEEccccE###EEEEEEccccTTccEEEEEEETTEEEEEEEcTTcEEEEEEEccccE############################################################# DISOP:02AL 355-356| PSIPRED cccccccHHHcccEEEccccEEEcccccEEEEEEcccccEEEEEEEcccccccccHHHcccccccccEEEEcccccEEEEEEcccccEEEEEEEcccccccccEEEcccccccccEEEEEEccccEEEEEEcccccEEEEEEEccccccccEEccccccccccccEEEEcccccEEEEEEcccccEEEEEccccccccccccccccccccccccEEEEEEcccEEEEEEcccccEEEEEEEcccccccccccccccccccccccEEEEccccEEEEEEEccccEEEEEccccccccEEEccEEEEcccEEEEEEccEEEEEEEEccccEEEEEEEcccccccccEEEEccEEEEc //