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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00379
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
f.42.1
:390 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   197->380 1okcA PDBj 2e-10 31.5 %
:RPS:PDB   47->382 2c3eA PDBj 1e-53 23.4 %
:RPS:SCOP  50->382 1okcA  f.42.1.1 * 4e-53 22.2 %
:HMM:SCOP  48->382 1okcA_ f.42.1.1 * 3.4e-76 39.7 %
:RPS:PFM   53->165 PF00153 * Mito_carr 4e-13 36.3 %
:RPS:PFM   197->269 PF00153 * Mito_carr 9e-12 47.3 %
:RPS:PFM   311->385 PF00153 * Mito_carr 3e-16 54.3 %
:HMM:PFM   51->167 PF00153 * Mito_carr 1.4e-26 41.9 93/96  
:HMM:PFM   176->271 PF00153 * Mito_carr 8.3e-28 36.7 90/96  
:HMM:PFM   291->386 PF00153 * Mito_carr 7e-26 42.2 90/96  
:BLT:SWISS 30->387 YKQ9_SCHPO 4e-81 52.5 %
:REPEAT 3|115->164|221->269|337->385
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00379 GT:GENE CIRG_00379 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 390 SQ:AASEQ MSFPAPSPDLSRGASRLKDGSEPRQSVMIQSGETDDVEVAPALETKSKPAVKPWAHFFAGAVGGMTAATLTSPLDVLKTRLQSDFYQAQLRSLRAAHPLPQSHSILSLSRSAMVHFSETVQILRSIHVHEGWRALFKGLGPNLTGVVPARAINFYVYGNGKRILNDYFGYIPTETPASIHLAAAAVAGIATGTATNPIWLVKTRLQLDKSNASNIPGRGRQYKNSLDCIRQTVRHEGIRGLYRGLTASYLGVTESSLQWVMYEEMKRILARRAARRAADPAHVRGWTDTAEHWVGTITAAGSAKLLAAAATYPHEVVRTRLRQAPTIPAGGGKVQMKYTGLMQCFRVIWKEEGMAGLYGGLTPHLLRVVPSAAIMFGMYEMILRLCGTTS BL:SWS:NREP 1 BL:SWS:REP 30->387|YKQ9_SCHPO|4e-81|52.5|337/361| NREPEAT 1 REPEAT 3|115->164|221->269|337->385| SEG 182->195|aaaavagiatgtat| SEG 270->278|arraarraa| SEG 299->310|aagsakllaaaa| BL:PDB:NREP 1 BL:PDB:REP 197->380|1okcA|2e-10|31.5|168/292| RP:PDB:NREP 1 RP:PDB:REP 47->382|2c3eA|1e-53|23.4|291/293| RP:PFM:NREP 3 RP:PFM:REP 53->165|PF00153|4e-13|36.3|90/97|Mito_carr| RP:PFM:REP 197->269|PF00153|9e-12|47.3|68/97|Mito_carr| RP:PFM:REP 311->385|PF00153|3e-16|54.3|70/97|Mito_carr| HM:PFM:NREP 3 HM:PFM:REP 51->167|PF00153|1.4e-26|41.9|93/96|Mito_carr| HM:PFM:REP 176->271|PF00153|8.3e-28|36.7|90/96|Mito_carr| HM:PFM:REP 291->386|PF00153|7e-26|42.2|90/96|Mito_carr| RP:SCP:NREP 1 RP:SCP:REP 50->382|1okcA|4e-53|22.2|288/292|f.42.1.1| HM:SCP:REP 48->382|1okcA_|3.4e-76|39.7|290/0|f.42.1.1|1/1|Mitochondrial carrier| OP:NHOMO 1788 OP:NHOMOORG 190 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----AB7-134-9CC47777876788588477866789797797776667859566488865968868787886ABABAC7AA99A54-9E67867566779AFEC-A6AHRLIGGB72446D8LD5J6T*J1IAK5866J78J959586D44I5DBAA88C66484I8AF56BB7453O46653VDPP7HI7679A7- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 311 STR:RPRED 79.7 SQ:SECSTR ##############################################cccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGccc####################ccTTTccccHHHHHHHHHHHHcGGGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTc##GGccccTTccccccHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHccTTccT###cccccccHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTTcccTTccTTcccccHHHHHHHHHHHTcccGGGTTTTHHHHHHHHHHHHHHHHHccc######## PSIPRED ccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //