[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00383
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  85/915 : Eukaryota  78/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:618 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   273->370 2vq7C PDBj 2e-07 27.6 %
:RPS:PDB   226->378 3dk9A PDBj 3e-11 14.2 %
:RPS:SCOP  317->514 1w4xA2  c.3.1.5 * 6e-12 17.8 %
:HMM:SCOP  177->385 1w4xA1 c.3.1.5 * 3.4e-38 26.5 %
:HMM:SCOP  317->511 2gvcA2 c.3.1.5 * 1.6e-20 31.4 %
:RPS:PFM   63->119 PF02336 * Denso_VP4 2e-04 31.6 %
:RPS:PFM   207->399 PF00743 * FMO-like 5e-20 32.8 %
:HMM:PFM   182->435 PF07992 * Pyr_redox_2 2.4e-17 27.9 147/202  
:HMM:PFM   473->515 PF00743 * FMO-like 0.00023 36.6 41/532  
:BLT:SWISS 245->514 FMO5_RAT 9e-11 25.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00383 GT:GENE CIRG_00383 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 618 SQ:AASEQ MHLQNMSTSARVVNNLPGGLPIAQVPLHTNPETVALEYVQRLQSLKASDFSEDALWRDTFAFTGTVRTFHTPADIETSWNDVTETHKPSDFALIPESARVVQIGVRSSWVEARFVFKTNGIPRQNGSGFVSLIPADGEWKIWLLRTILEGIDGLPDVDVLNPTAHPVPNGHQNGIVEPTNYDCVVVGAGQAGLAAAGRLKALGVQYLLIDKNAAIGDNWLLRYESAKLHTVRNYAHLPFERTFTPDWKEFLPKRDVAKGFEIWFNRYGINAWFSTNLESGKWDEDKKEWAIRVIQEGKEVILTTKHLVLAVGGGGQIPRMPTFPDREKFKGVVLHSVDYTDAKEWRGKKGVVVGAANTAHDVAEDMQAAGMDTTMVQRQATYVVPTDYYLKVTGAVFNDQIPIEIADRIQFSNPIAIGRQIVAYHLHKMIRADPERFDSLERAGFLLDRFGDITYHVSERGGGHYMDVGGSGKISKGLIKMKSDALITAYTENGLLFSDGSELKADVIVFTTGFVGTLRDEIAKYLGQQIADQVDEYWGLDTEGEIRGAYKPIGHPGLWYTGGTLGHSRFFSRFLGLQIRAALDGTPLPVYEKLPGRPNMKARPLGEITEFLAGAEAN BL:SWS:NREP 1 BL:SWS:REP 245->514|FMO5_RAT|9e-11|25.6|246/533| SEG 184->204|vvvgagqaglaaagrlkalgv| SEG 469->483|ggsgkiskglikmks| BL:PDB:NREP 1 BL:PDB:REP 273->370|2vq7C|2e-07|27.6|98/445| RP:PDB:NREP 1 RP:PDB:REP 226->378|3dk9A|3e-11|14.2|148/462| RP:PFM:NREP 2 RP:PFM:REP 63->119|PF02336|2e-04|31.6|57/433|Denso_VP4| RP:PFM:REP 207->399|PF00743|5e-20|32.8|186/247|FMO-like| HM:PFM:NREP 2 HM:PFM:REP 182->435|PF07992|2.4e-17|27.9|147/202|Pyr_redox_2| HM:PFM:REP 473->515|PF00743|0.00023|36.6|41/532|FMO-like| GO:PFM:NREP 6 GO:PFM GO:0005198|"GO:structural molecule activity"|PF02336|IPR003433| GO:PFM GO:0019028|"GO:viral capsid"|PF02336|IPR003433| GO:PFM GO:0004499|"GO:flavin-containing monooxygenase activity"|PF00743|IPR000960| GO:PFM GO:0050660|"GO:FAD binding"|PF00743|IPR000960| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF00743|IPR000960| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00743|IPR000960| RP:SCP:NREP 1 RP:SCP:REP 317->514|1w4xA2|6e-12|17.8|197/235|c.3.1.5| HM:SCP:REP 177->385|1w4xA1|3.4e-38|26.5|204/0|c.3.1.5|1/2|FAD/NAD(P)-binding domain| HM:SCP:REP 317->511|2gvcA2|1.6e-20|31.4|105/0|c.3.1.5|2/2|FAD/NAD(P)-binding domain| OP:NHOMO 410 OP:NHOMOORG 163 OP:PATTERN -------------------------------------------------------------------- -----1-1111---122----8--33------77672242---1----------1-------2--1-21-----------------------------------------------------------------------1---1----------------------------------------------------------1------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------111-------31----11-11--------------------14---111------11---1-1--11111----------2--------------------------------------11-------1--1-11111122--1111----1---1--11-1----11--11----------------11---------------------------------1--------------------------------1------1---------------------------------------------------------------------------------------------------------------------------------1--1--------------------------------------------------------------------------------------------------------------------------------------------- --------------1341176646655223423112535334422211244266222121111-211-------1--------------CI54521234-111-----214----------------------------------------------1---6-----------------------674D1C5------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 247 STR:RPRED 40.0 SQ:SECSTR ##############################################################################################################################################################################################################EEEEccccTTHHHHHHHHHHHHHHHHHHTTTTTTTcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEEccEEEccccccEEEETTEEEEcccEEEcccEEGGGEccccTTTcTTGGGcTTccHHHHTTccccccEEEEEcccHHHHHHHHHHHHTTcEEEEEccGGGGcccccccTTcccTTccccccHHHEHHHTTHHHHHHTccEEETTEEEEEccc#GGGcHHHHHHcccTTccccc#################################################################################################################################################################### PSIPRED ccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEEEEEEcHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEEEEccccccccEEEEEEEEccccEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHccccEEEEEcccccccEEEEccccEEEEccHHHccccccccccccccccccHHHHHHHHHHHHHHHccEEEEccEEEEEEEcccccEEEEEEEEcccEEEEEEEEEEEEcccccccccccccccccccccEEEEEEccccHHHccccEEEEEcccHHHHHHHHHHHHHccEEEEEEEcccEEEEccHHcccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHcccccEEEEccccEEEEEccEEEEccccEEEccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHcccccc //