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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00386
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  46/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
b.69.4d.17.4
:703 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   367->493 1erjB PDBj 3e-16 33.9 %
:RPS:PDB   252->483 2e32A PDBj 1e-19 5.0 %
:RPS:PDB   493->576 2aqqA PDBj 1e-05 19.0 %
:RPS:SCOP  244->436 1pguA2  b.69.4.1 * 1e-15 19.0 %
:RPS:SCOP  427->567 2bhmA1  d.17.4.26 * 4e-08 8.7 %
:HMM:SCOP  254->641 1gotB_ b.69.4.1 * 1.6e-46 27.5 %
:HMM:PFM   258->282 PF00400 * WD40 0.00053 28.0 25/39  
:HMM:PFM   366->392 PF00400 * WD40 0.00012 29.6 27/39  
:HMM:PFM   398->436 PF00400 * WD40 1e-10 40.5 37/39  
:HMM:PFM   447->481 PF00400 * WD40 8.9e-05 34.3 35/39  
:HMM:PFM   40->159 PF10446 * DUF2457 0.00085 27.2 114/457  
:BLT:SWISS 242->627 LE14B_LITER 2e-78 49.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00386 GT:GENE CIRG_00386 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 703 SQ:AASEQ MSSSHFPTPTLAEPHSESDAATQSDVSYHLAREQMSDRYDEGCGDEDEDRDFEPESEEWEEEDDDEDEEDNLDHELLEDEAVRELLDQEDGDVHIEFTVEDSDQAEDAEGDNTTRTGATRVTTEQLFRLLGATGLRRILQTHGLWRGQASHNEDDEDAFVFGSYGFRRRRRQKPVEDLYPKIPSEAGAELMVSGTFGSNPYYLDRIKNRRTKFGTKMLWRELGLGPRGADLRAARAIPQGLIPSSVPDKIVHFDSRCYSGQFSDDGNFFFCCGQDFKVRMYDTSNPCDWKYYKTVECPFGQWTITDASLSPDNKYLACSSISNVVCLASTDPASSADPHILDFAKSRRLRGPNLQGFNHPASGAFGIWSIRFSGDGREIVAGTSDRSVVVYDIETQQPILRLQNHEDDVNAVCFGDNSSPHILYSGSDDTTLRVWDRRSMADGREAGVFLGHTEGLTFVDSKGDGRYVLSNGKDQLMKLWDLRKMMTISKFDTIDPSRYSTGFDYRFMNFTDEDYQPHPYDCSVVTFRGHSVLRTLIRCHFSPPQSTNSRYVYTGSESGKVYIYNLDATIAGIVDVAKATYLTRPMDPDIYGPASHYRRLDNQWKTVVRDASWHPSAPILAATSWNGWGMSMGTCTVHSWNDDALDDEGDPSLGQSYNARLEYVESFNRFSDLNRDSDHGLRSQPVHRQTRQSDAGESSESIW BL:SWS:NREP 1 BL:SWS:REP 242->627|LE14B_LITER|2e-78|49.7|342/473| SEG 37->80|drydegcgdededrdfepeseeweeedddedeednldhellede| SEG 113->123|ttrtgatrvtt| BL:PDB:NREP 1 BL:PDB:REP 367->493|1erjB|3e-16|33.9|121/348| RP:PDB:NREP 2 RP:PDB:REP 252->483|2e32A|1e-19|5.0|201/240| RP:PDB:REP 493->576|2aqqA|1e-05|19.0|84/155| HM:PFM:NREP 5 HM:PFM:REP 258->282|PF00400|0.00053|28.0|25/39|WD40| HM:PFM:REP 366->392|PF00400|0.00012|29.6|27/39|WD40| HM:PFM:REP 398->436|PF00400|1e-10|40.5|37/39|WD40| HM:PFM:REP 447->481|PF00400|8.9e-05|34.3|35/39|WD40| HM:PFM:REP 40->159|PF10446|0.00085|27.2|114/457|DUF2457| RP:SCP:NREP 2 RP:SCP:REP 244->436|1pguA2|1e-15|19.0|168/281|b.69.4.1| RP:SCP:REP 427->567|2bhmA1|4e-08|8.7|127/134|d.17.4.26| HM:SCP:REP 254->641|1gotB_|1.6e-46|27.5|273/0|b.69.4.1|1/1|WD40 repeat-like| OP:NHOMO 1755 OP:NHOMOORG 241 OP:PATTERN --------------------------------------------------12---------------- ---------------------1--1------------1---213--------------------1-----1------------------------------------------------------2111211115122214-----S9E312A1------------AMHMC-------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------1------------4------------------1-------------------1--------14--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------- 11--A87-535-4484733996468B73334338675878688222AF8K559A674A344563245323542433423333332257-7GJ7DH*7463325FIJ1937KFDDDCD51646A7F92E3KsC1BAH2544966D644655954G587B99ID7A9A2C7566CED2985y11155G9GF2D7-27A8A8 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 409 STR:RPRED 58.2 SQ:SECSTR ################################################################################################################################################################################################################################################HccccEEEEEcHHHHTcHHHHHHHHHHTcccccHHHHHHHHHHccEEEccccccccccTTTccTcEEEEEcTTcccEEEcccTTccccEEEEcccTTcccccccccccEEEEEEcccccEEEEEEcEEEEEEETTTTTccHHHHTTTccEEEEEEEEEccccccEEEEEEEEEEcTETTTEEEEEEEEEEEEEcTTccTccEEEEEEEEccccTTEEEEEEEEEEccccccccccEEEEEEEEcccEEEEcccccEEEEEEcTTccEEEEEETTEEEETTTccEEEEEEccccccEEEEEEcTcEccTccEEEEEETTccEEEEEEccEEEEEGGGTTccccHHHHTTccTTEEEEEccccccEcTccEEEEEccccTTEEEEEETTEEEHHHHcccccGcEEGTTTcc###################################################### DISOP:02AL 17-18,20-20,25-26,31-32,34-34,39-39,45-57,59-60,703-704| PSIPRED cccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccEEccccccccccccccEEHHHHHHHHHHccccEEEEEEcccccccccccccccccHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccHHHHccccccEEEEEEcccccEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEcccccccEEEEEEEEEccccEEEEEEEcccccEEEEEEcccEEEEEEcccccccccEEEccccccEEcccccEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEEcccccEEEEEEcccccccEEEEEEcccEEEEEEcccccccEEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEcccccEEEEcccccEEEEEccccEEEEEEEEEEEEEcccccEEEEEEEEcccccccccEEEEEEccccEEEEEEcccEEEEEEcccccEEEEEcccccEEEEcccccEEEcccccEEEEEEcccccEEEEEEccccccccccEEEEEEEccccccccccccEEEEccEEEEEEEEccccccccccccccccccccccEEccccccccEEEc //