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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00388
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  59/199 : Viruses  0/175   --->[See Alignment]
a.4.1d.153.1
:623 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   268->321 1ityA PDBj 5e-06 46.2 %
:RPS:PDB   271->352 2ajeA PDBj 2e-07 17.1 %
:RPS:PDB   450->502 2ajeA PDBj 3e-07 37.0 %
:RPS:SCOP  151->240 1ai4.1  d.153.1.2 * 4e-04 16.3 %
:RPS:SCOP  273->321 1w0tA  a.4.1.4 * 6e-12 46.8 %
:RPS:SCOP  450->507 1xc5A1  a.4.1.3 * 4e-08 14.8 %
:HMM:SCOP  265->329 1xg1A1 a.4.1.4 * 6.9e-06 27.0 %
:HMM:SCOP  446->513 1ityA_ a.4.1.4 * 6.7e-08 27.3 %
:HMM:PFM   276->321 PF00249 * Myb_DNA-binding 1.2e-07 32.6 43/48  
:HMM:PFM   453->499 PF00249 * Myb_DNA-binding 1.4e-05 25.0 44/48  
:BLT:SWISS 184->290 TCHL1_HUMAN 4e-04 33.3 %
:BLT:SWISS 277->329,447->511 MU152_SCHPO 1e-16 55.4 %
:REPEAT 2|268->381|447->558
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00388 GT:GENE CIRG_00388 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 623 SQ:AASEQ MPWNEVHDTDIPTRPHLRIAPLRNPIPPGSRKIPSPLEPATTGIRDSGASKPPNLPSGNPPTELPTLEDFLRAARRDNDLPHILGMLPSSEQPPKTILPAFISLRAVEKLPYSSFSDEAPRKRRRLEHVGDNFGELLQLPIPKVQKEIPKPRPFGPLPILNELKEPPPNAALFPPIEANRRPVILNPPGKGTSPSTEQPSSEQAGERRAQRIEDLIELNDQDGGANMESQASDNRSADTQETDQAELASDTERVIDGYDKSAARKESKKPKRKLRRWSEQETHDLLRGVVRCGAGNWTTILAQRDLKFNQRTPGNLKDRFRVCCPWAYESGQTPTSDDIQARLADSISNAQSGLVAKIVLPDPRVAKGGLDFNKGSIGTSSLSVANSSRPTTELVRPCRFTAPDLQQKQSKLKQKRSSGLNGSQGLSNKSKSTLISLGLQNPDATVKSTRRHRRPFTPAEDEALLKGYAVHGFQWTLIRQDKHLDLMHRKATDLRDRFRTKFPDVYREGGFATVKKIESNIKGGKTPATDGTKSSLSSTNNAKFANHNSRKADIPTSTSGATAVPIDPAMSPPAPPSSLPEPPNVPVTPSFSFPIDEDVPEENSYAIRWAENTLPPLVWDELG BL:SWS:NREP 2 BL:SWS:REP 184->290|TCHL1_HUMAN|4e-04|33.3|102/100| BL:SWS:REP 277->329,447->511|MU152_SCHPO|1e-16|55.4|118/390| NREPEAT 1 REPEAT 2|268->381|447->558| SEG 405->430|lqqkqsklkqkrssglngsqglsnks| SEG 564->587|vpidpamsppappsslpeppnvpv| BL:PDB:NREP 1 BL:PDB:REP 268->321|1ityA|5e-06|46.2|52/67| RP:PDB:NREP 2 RP:PDB:REP 271->352|2ajeA|2e-07|17.1|82/97| RP:PDB:REP 450->502|2ajeA|3e-07|37.0|53/97| HM:PFM:NREP 2 HM:PFM:REP 276->321|PF00249|1.2e-07|32.6|43/48|Myb_DNA-binding| HM:PFM:REP 453->499|PF00249|1.4e-05|25.0|44/48|Myb_DNA-binding| RP:SCP:NREP 3 RP:SCP:REP 151->240|1ai4.1|4e-04|16.3|86/763|d.153.1.2| RP:SCP:REP 273->321|1w0tA|6e-12|46.8|47/52|a.4.1.4| RP:SCP:REP 450->507|1xc5A1|4e-08|14.8|54/68|a.4.1.3| HM:SCP:REP 265->329|1xg1A1|6.9e-06|27.0|63/0|a.4.1.4|1/2|Homeodomain-like| HM:SCP:REP 446->513|1ityA_|6.7e-08|27.3|66/67|a.4.1.4|2/2|Homeodomain-like| OP:NHOMO 60 OP:NHOMOORG 59 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------111111111111111111111111111111111111111111111111-----------------------11-1111111-----1---------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 194 STR:RPRED 31.1 SQ:SECSTR ################################################################################################################################################################################################################################################################ccccccccccccTTccccccccHHHHHHHHHHHHHHccccHHHHHccccccTTcccHHHHHHHHHHHHHccTTTTTccccccHHHHHHHHHHHHHH#############################################################################################ccccccccccccHHHHHHHHHHHHHccTTcTTHHcHHHHHHHTccHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHHHHHcTTHHHH################################################################################ DISOP:02AL 8-20| PSIPRED cccHHcccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccHHHHHHccHHHHHHccccccccccccccccccccccHHHHHHHHHccHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHcccccccccccHHHHHHHHHHHcHHHHcccccHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccHHccccccccccccccccHHHHHccccccccccccccccccccccccccHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHcHHHHHHHcccccEEEcccccccccccccccccccccccccccccccccHHcccHHHccccEEEEcccccccccccccccccccccccccEEEEcccccccccEEEccccccccccHHHccc //