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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00392
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  0/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
d.66.1
:262 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   81->189 1earA PDBj 2e-29 17.3 %
:RPS:SCOP  51->102 1h3eA2  d.66.1.4 * 5e-07 15.4 %
:RPS:PFM   4->40 PF08071 * RS4NT 1e-12 75.7 %
:RPS:PFM   94->169 PF00900 * Ribosomal_S4e 2e-28 75.0 %
:HMM:PFM   94->170 PF00900 * Ribosomal_S4e 4.5e-35 46.8 77/77  
:HMM:PFM   3->39 PF08071 * RS4NT 1.2e-21 70.3 37/38  
:HMM:PFM   43->90 PF01479 * S4 9.7e-08 31.9 47/48  
:HMM:PFM   181->211 PF00467 * KOW 4.8e-06 21.4 28/32  
:BLT:SWISS 1->257 RS4A_SCHPO e-117 76.7 %
:PROS 8->22|PS00528|RIBOSOMAL_S4E

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00392 GT:GENE CIRG_00392 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 262 SQ:AASEQ MGRGPKKHQKRLSAPSHWLLDKLSGAYAPRPSPGPHKLRDCLPLIVFIRNRLKYALNGRETNAILMQRLVKVDGKVRTDATYPAGFMDVISIEKTGENFRLIYDTKGRFTVHRISGEEAEYKLGKVKRVQLGKGGIPFLVTHDARTIRYPDPAIKVNDTVKIDIATGKITDFIKFDTGVICMATGGRNMGRVGVITHRERHEGGFGIVHIKDAIDNTFATRESNVFVIGHEKPWVSLPKGKGVKLSIAEERDRRRAMALAGR BL:SWS:NREP 1 BL:SWS:REP 1->257|RS4A_SCHPO|e-117|76.7|257/262| PROS 8->22|PS00528|RIBOSOMAL_S4E|PDOC00457| RP:PDB:NREP 1 RP:PDB:REP 81->189|1earA|2e-29|17.3|98/142| RP:PFM:NREP 2 RP:PFM:REP 4->40|PF08071|1e-12|75.7|37/37|RS4NT| RP:PFM:REP 94->169|PF00900|2e-28|75.0|76/77|Ribosomal_S4e| HM:PFM:NREP 4 HM:PFM:REP 94->170|PF00900|4.5e-35|46.8|77/77|Ribosomal_S4e| HM:PFM:REP 3->39|PF08071|1.2e-21|70.3|37/38|RS4NT| HM:PFM:REP 43->90|PF01479|9.7e-08|31.9|47/48|S4| HM:PFM:REP 181->211|PF00467|4.8e-06|21.4|28/32|KOW| RP:SCP:NREP 1 RP:SCP:REP 51->102|1h3eA2|5e-07|15.4|52/81|d.66.1.4| OP:NHOMO 434 OP:NHOMOORG 260 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1121111142211111111111111111111111111111111111111111111111111112211112122122212212222123-111111111111112231111212111111-112146-A17Y3-7481111111M2111-12-13121112411112121-111111111H1111163561311111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 129 STR:RPRED 49.2 SQ:SECSTR ##################################################HTTccccHHHHHHHHHTTcEEETTEEccccccccEEcccGGGcccEEEEEEEcGGGGGccEEEEEcTTccEEEEEccccccccTTcEEEEEcccEEEEEEEccEEEE##########EEEcccHHHHHHHHHHHHHTTc######################################################################### PSIPRED ccccHHHHHHHHcccccccccccccEEEEccccccccHHHccEEEEEEEcHHcccccHHHHHHHHHcccEEEccEEEccccccccEEEEEEEcccccEEEEEEccccEEEEEEccHHHccEEEEEEEEEEEEcccEEEEEEccccEEEccccccccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEEEEEEEEccccEEEEEEcccccEEEEEcccEEEEcccccEEEccccccccccHHHHHHHHHHHHHHcc //