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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00394
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  646/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.58.32
:560 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   136->352 2uuuC PDBj 3e-21 28.4 %
:RPS:PDB   89->556 1e8gA PDBj 4e-87 16.9 %
:RPS:SCOP  89->310 1ahuA2  d.145.1.1 * 7e-47 23.0 %
:RPS:SCOP  311->560 1f0xA1  d.58.32.2 * 2e-45 14.8 %
:HMM:SCOP  85->310 1diqA2 d.145.1.1 * 6.9e-69 39.4 %
:HMM:SCOP  281->557 1e8gA1 d.58.32.1 * 1.8e-69 31.7 %
:RPS:PFM   138->270 PF01565 * FAD_binding_4 1e-21 37.9 %
:RPS:PFM   310->553 PF02913 * FAD-oxidase_C 7e-35 32.5 %
:HMM:PFM   309->554 PF02913 * FAD-oxidase_C 4.4e-64 31.7 246/249  
:HMM:PFM   136->272 PF01565 * FAD_binding_4 7.5e-38 33.3 135/138  
:BLT:SWISS 89->555 DLD1_KLULA e-119 46.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00394 GT:GENE CIRG_00394 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 560 SQ:AASEQ MKAFSRAAAQFSRRGVNVAPRQQGLPVQATRRRWNSSATHPQNASKSSTSTSWKTSQIVVAAAAAIASGYVFGKYYSESQQTVIANDLKYGTLEEMEKAIAELREILGEEAISTDDEVLHLHGYSEWSTVNSDRLPVAVAYPKDTEQVSKIAQVCHKYRVPMVPYSGGSSLEGNFSAPHGGISIDFLHMDKIIELHEDDLDVVVQPSMQWIQLNEELKDTGLFFPIDPGPPARIGGMVGTNCSGTNAVRYGTMKDWVINLTVVLADGRIIKTRHRPRKSSAGYNLTGMFVGSEGTLGIVTEITLKLAVIPEQTRVGVATFNSIRDAASAAMRVMRRGVPIQCMEILDEVQMSIINRAGGTNRVWKECPTLFFKFSGTKSGVSESISITKGIAKQSGGTSFEFARNDKEGRDLWSARKESLWSMLALREDGSSDVWSTDVAVPLSRLPDIIELSKKDLDDLGMYACVLGHVGDGNFHASIMYDRKNPEQRAKVEKVVYDMVDRAIEMEGSCTGEHGVGMGKMSSLIKELGPETIDVMRSVKRALDPHWLLNPGKIFDAKRK BL:SWS:NREP 1 BL:SWS:REP 89->555|DLD1_KLULA|e-119|46.6|464/576| SEG 3->14|afsraaaqfsrr| SEG 45->56|sksststswkts| SEG 58->67|ivvaaaaaia| BL:PDB:NREP 1 BL:PDB:REP 136->352|2uuuC|3e-21|28.4|211/541| RP:PDB:NREP 1 RP:PDB:REP 89->556|1e8gA|4e-87|16.9|467/550| RP:PFM:NREP 2 RP:PFM:REP 138->270|PF01565|1e-21|37.9|132/139|FAD_binding_4| RP:PFM:REP 310->553|PF02913|7e-35|32.5|240/242|FAD-oxidase_C| HM:PFM:NREP 2 HM:PFM:REP 309->554|PF02913|4.4e-64|31.7|246/249|FAD-oxidase_C| HM:PFM:REP 136->272|PF01565|7.5e-38|33.3|135/138|FAD_binding_4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0003824|"GO:catalytic activity"|PF02913|IPR004113| GO:PFM GO:0050660|"GO:FAD binding"|PF02913|IPR004113| RP:SCP:NREP 2 RP:SCP:REP 89->310|1ahuA2|7e-47|23.0|222/268|d.145.1.1| RP:SCP:REP 311->560|1f0xA1|2e-45|14.8|229/237|d.58.32.2| HM:SCP:REP 85->310|1diqA2|6.9e-69|39.4|226/0|d.145.1.1|1/1|FAD-binding domain| HM:SCP:REP 281->557|1e8gA1|1.8e-69|31.7|240/0|d.58.32.1|1/1|FAD-linked oxidases, C-terminal domain| OP:NHOMO 2517 OP:NHOMOORG 877 OP:PATTERN 22-1-143345444441133321331111122----------------13211----1--12113-11 12455--1111-2-33333-332255434443333328D7145431121111143312--33524664531--------1-141111111---1-------211121212---------------11-2111221166655---232322332222222122222232222-1-----1----22233--131122222222223222353111122244413--------2------------------------1111----11--21------------------------------------------------------4-121111111212-122211131-1-1--2-461121--52--1--1-322311411111338652254553444444443446-45644B4855415443349535766432154444564342222222242232226-----------------------------117611544456447473444477A8444433A587777-333365544837549335211-23111111153374414734345453445-344132222653646232--1122112112111111111111331-1-31213-21111112211222212232---5223------21111114213434444-244444444424444444112111111111111111111111121121111--111111111111---1--111-11122335111111-11111111111111124251555557444555643333----3---11112222221112222222222232222111-221122--------1-1--------------------------11---2---421 ----332-741-24234555534575533333333335343441334444687A4334344423324334225243313334446312-47443323332322432-325733453331-1332842529M5-4351311322311313331-33352558434322425335342332Y3322231174313386652 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 491 STR:RPRED 87.7 SQ:SECSTR #####################################################################TccccccccHHHHHHHGGGTTccHHHHHHHHHHHHHHHcGGGEEEcccccccccccccccccccTTccEEEccccHHHHHHHHHHHHHHTccEEEEcccccTTTTTcccTTcEEEEcTTcccEEEEETTTTEEEEcTTccHHHHHHHHHHTTcTTTEEccccccccHHHHHHTTcccccTTccTGGGEEEEEEEETTccEEEcGGTTTTcccccccccGGGGcccccEEEEEEEEEcEEccccEEEEEEEEccTTHHHHHHHHHHHHHTccccccEEEEHHHHHHHHccGGGTcccccEEEEEEEEccHHHHHHHHHHHHHHHTTcTTcEEEEcGGGccTTcHHHHHHHHTTTccccGGGEEEEEEccEEcccHHHHHHHHHHHHHHHHHHTccccEEEEEccccEEEEEEEETTcHHHHHHHHHHHHHHHHHHHHTTcccccccGGGHHHHHHHTcHHHHHHHHHHHHHHHHHcTTccccTTGGGcccTT PSIPRED ccHHHHHHHHHHccccccccHHccccccHHHHHccccccccccccccccccccccHHHHHHHHHHHHHcccEEcccccccccccccccccccHHHHHHHHHHHHHHcccccEEccHHHHHHcccccccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccccccEEEEccccccEEEEEccccEEEEEccccHHHHHHHHHHcccEEccccccccEEHHccccccccccccccccHHHHEEEEEEEcccccEEEccccEEcccccccHHHHHHccccccEEEEEEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccccc //