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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00398
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  43/199 : Viruses  0/175   --->[See Alignment]
:353 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   77->313 PF09807 * DUF2348 1e-09 34.1 %
:HMM:PFM   78->122 PF09807 * DUF2348 1.5e-05 22.2 45/251  
:HMM:PFM   206->325 PF09807 * DUF2348 1.5e-09 26.9 104/251  
:BLT:SWISS 275->342 CC075_RAT 3e-04 26.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00398 GT:GENE CIRG_00398 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 353 SQ:AASEQ MPTATAPLLAPYTSPPPARSLSLITSLLGTTSNWLVLRFLCDALYSSSSSSVRGRWQEDVEIGIGIEGEGVTIGGRKGTMRVILISFLRGWEFWRTEAKRLGVDLTKLANERKFAFVDGLTELFSSENLHSAPVPTTLRGRPPAAHASRFISTARSHPATHPVPVHQKASGPTKLHWSKMANLEALERGVISAIDNLHGAAGEEDRVPATEDVLLVIDQPDMLLAATGPDAGVGALEIKDMIMSLRQHVHSTLVTLAADSPLIHYEEPGTPLEMEHATLVVGMAYQARMVIQLRGLETGVARDVSGVLQVNKGTQFMDLSSSRDLGEDYDLEPKEVLYYVQGDGAVRVFGRGE BL:SWS:NREP 1 BL:SWS:REP 275->342|CC075_RAT|3e-04|26.5|68/266| SEG 20->32|slslitsllgtts| SEG 46->51|ssssss| SEG 58->75|edveigigiegegvtigg| RP:PFM:NREP 1 RP:PFM:REP 77->313|PF09807|1e-09|34.1|170/220|DUF2348| HM:PFM:NREP 2 HM:PFM:REP 78->122|PF09807|1.5e-05|22.2|45/251|DUF2348| HM:PFM:REP 206->325|PF09807|1.5e-09|26.9|104/251|DUF2348| OP:NHOMO 43 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------1111111111111111111111111111111---1--111-111111-----------------------------1------------------------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 353-354| PSIPRED ccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEEEcccHHHccccEEEEEEHHcccccccEEEEEccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHccccccccccccccccEEEEEcHHHHHHHccccccHHHHHHHHHHHHHHHHHHEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEcccccccccccccccccccccccccEEEEEEcccEEEEEEccc //