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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00418
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
d.64.1
:114 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->114 2oghA PDBj 2e-31 64.5 %
:RPS:PDB   28->98 1d1rA PDBj 5e-11 23.9 %
:RPS:SCOP  1->114 2if1A  d.64.1.1 * 9e-31 50.5 %
:HMM:SCOP  1->114 2if1A_ d.64.1.1 * 3.2e-30 44.1 %
:RPS:PFM   22->98 PF01253 * SUI1 8e-13 53.9 %
:HMM:PFM   23->99 PF01253 * SUI1 1.1e-32 57.1 77/83  
:BLT:SWISS 1->114 SUI1_YEAST 7e-31 64.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00418 GT:GENE CIRG_00418 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 114 SQ:AASEQ MSIENLKTFDPFAEADEDTGDTKQSQNYIHIRIQQRNGRKTLTTVQGLPKKFDQKKILKVIKKKFACNGTIVNDSEMGEVIQLQGDQRKDVQEFLTDKKEGLELDAKTIKVHGF BL:SWS:NREP 1 BL:SWS:REP 1->114|SUI1_YEAST|7e-31|64.5|107/108| SEG 50->64|kkfdqkkilkvikkk| BL:PDB:NREP 1 BL:PDB:REP 1->114|2oghA|2e-31|64.5|107/108| RP:PDB:NREP 1 RP:PDB:REP 28->98|1d1rA|5e-11|23.9|67/83| RP:PFM:NREP 1 RP:PFM:REP 22->98|PF01253|8e-13|53.9|76/83|SUI1| HM:PFM:NREP 1 HM:PFM:REP 23->99|PF01253|1.1e-32|57.1|77/83|SUI1| GO:PFM:NREP 2 GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF01253|IPR001950| GO:PFM GO:0006413|"GO:translational initiation"|PF01253|IPR001950| RP:SCP:NREP 1 RP:SCP:REP 1->114|2if1A|9e-31|50.5|111/126|d.64.1.1| HM:SCP:REP 1->114|2if1A_|3.2e-30|44.1|111/126|d.64.1.1|1/1|eIF1-like| OP:NHOMO 326 OP:NHOMOORG 190 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 1111111-311-11111221111111111111111111-111111112111111121111111-13111111-111111111111111-12111111111111222-111111112132B223337332293-2353212512223252222273322223111211111211111111D11111344625211111-1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 113 STR:RPRED 99.1 SQ:SECSTR cccccccccccccccccccccccccccccEEEEEEcccccccEEEEcccccHHHHHHHHHHHTTccccccccccTTccccEEEccccHHHHHHHHHHH#HTHTcccccEEEccc PSIPRED cccccccccccccccccccccccccccEEEEEEEEccccEEEEEEccccccccHHHHHHHHHHHHccccEEEEcccccEEEEEEccHHHHHHHHHHHccccccccHHHEEEccc //