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Coccidioides immitis RMSCC 2394 (cimm2)
Gene : CIRG_00433
DDBJ      :             
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  54/199 : Viruses  0/175   --->[See Alignment]
c.47.1d.15.1
:452 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   253->338 2dzkA PDBj 2e-06 34.1 %
:RPS:PDB   67->113 3d4tA PDBj 1e-04 19.1 %
:RPS:PDB   243->345 2cr5A PDBj 8e-07 18.6 %
:RPS:SCOP  64->110 1r26A  c.47.1.1 * 3e-04 19.6 %
:RPS:SCOP  260->335 1h8cA  d.15.1.2 * 3e-11 21.1 %
:HMM:SCOP  194->338 1s3sG_ d.15.1.2 * 3.6e-17 28.9 %
:HMM:PFM   255->337 PF00789 * UBX 4.3e-14 33.8 77/80  
:HMM:PFM   188->281 PF09271 * LAG1-DNAbind 0.00095 21.7 92/140  
:BLT:SWISS 1->108 UBXN4_BOVIN 7e-05 23.4 %
:BLT:SWISS 252->358 UBX7_YEAST 1e-08 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Abbreviations Back to title page
GT:ID CIRT_00433 GT:GENE CIRG_00433 GT:PRODUCT GT:DATABASE Broad_Institute GT:ORG cimm2 LENGTH 452 SQ:AASEQ MFYEGDLQSGITLAVQQAKQVVCFVRDEGEESTRWEDEYLADEEITQLLTSNSVALRLTAGSQEAGFLASFCPINKIPTLVAIKNGVLQEYIVSGTAEDELKKRLKTILNPTQVLQASQASQSEALSQPTHQVPTPSPSSDNVNTPAPEPEPSEEETPAEIARRESVRQGKRRAASPEPVSRPRDPAGNTQKIWRQQQFSRERREREERERVLALIRQDKEERRARAEQQRLSHTQQSDSQDTEQRPRPITQRDRASEYRLQVRVFDGSSIRSKFFPTQTVRNDVRPWIDSQRTDGNTPYNLKQILTPLPNKTISISEENQSLSDLGLGPTANLVMVPIHSYTEAYATSESSLPVRGLYAGYNLVTGAVGTVAGALGSFLGLTHGQPASPPETSSRAEQATGAGENSVRNPRSPRSNNIRTLYDGPSDEADRQFYNGNQLNFEPRIDQDKND BL:SWS:NREP 2 BL:SWS:REP 1->108|UBXN4_BOVIN|7e-05|23.4|107/508| BL:SWS:REP 252->358|UBX7_YEAST|1e-08|33.3|96/436| SEG 115->128|lqasqasqsealsq| SEG 145->160|tpapepepseeetpae| SEG 201->211|rerrereerer| SEG 221->231|eerraraeqqr| SEG 364->377|lvtgavgtvagalg| SEG 406->420|nsvrnprsprsnnir| BL:PDB:NREP 1 BL:PDB:REP 253->338|2dzkA|2e-06|34.1|82/109| RP:PDB:NREP 2 RP:PDB:REP 67->113|3d4tA|1e-04|19.1|47/96| RP:PDB:REP 243->345|2cr5A|8e-07|18.6|97/109| HM:PFM:NREP 2 HM:PFM:REP 255->337|PF00789|4.3e-14|33.8|77/80|UBX| HM:PFM:REP 188->281|PF09271|0.00095|21.7|92/140|LAG1-DNAbind| RP:SCP:NREP 2 RP:SCP:REP 64->110|1r26A|3e-04|19.6|46/113|c.47.1.1| RP:SCP:REP 260->335|1h8cA|3e-11|21.1|71/82|d.15.1.2| HM:SCP:REP 194->338|1s3sG_|3.6e-17|28.9|114/0|d.15.1.2|1/1|Ubiquitin-like| OP:NHOMO 55 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------11111111111111111111111211111111111111111111111----1---1--------1------------1-----------11-----------------------------------------------------------------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 161 STR:RPRED 35.6 SQ:SECSTR ###############################################################GcHTcccccccccccEEEEEETTEEEEEEEccccHHHHHHHHHHHHHHTc#################################################################################################################################ccccccccccccccccEEEEEEcTTccEEEEEEEccccTHHHHHHHHHHHTccTTTEccccEEEcccccccccTccccccHHHHTccccEEEEEEEccccccccccccccc################################################################################################### DISOP:02AL 452-453| PSIPRED ccccccHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHccHHHHHHHHcccEEEEEEccHHHHHHHHHHcccccccEEEEEcccEEEEEEEccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEEccccHHHHHHHHHHHHHccccccccccEEccccccccccccHHccccHHHHcccccEEEEEEEccccccEEccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccHHcccccccccccccccccccc //